Factsheet for HORVU7Hr1G024060.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G010100.1	Wheat	nucleus	98.3	52.91
TraesCS7A01G112000.1	Wheat	nucleus	98.3	52.91
HORVU7Hr1G023980.1	Barley	nucleus	98.3	52.91
TraesCS7D01G107600.2	Wheat	nucleus	97.73	52.6
EER87873	Sorghum	nucleus	78.41	41.44
Zm00001d045305_P001	Maize	nucleus	77.84	40.9
Os06t0155300-01	Rice	plasma membrane	79.55	39.66
KRH27315	Soybean	cytosol	44.32	26.53
GSMUA_Achr2P20050_001	Banana	nucleus	44.32	26.35
VIT_19s0014g01690.t01	Wine grape	cytosol	44.32	25.24
Bra021588.1-P	Field mustard	cytosol, plastid	37.5	25.0
CDY32322	Canola	cytosol, plastid	36.36	24.71
KRH55128	Soybean	mitochondrion, nucleus	41.48	24.66
AT3G15050.1	Thale cress	plastid	35.8	24.32
CDY20099	Canola	cytosol	36.36	24.24
Solyc12g014130.1.1	Tomato	nucleus	35.8	24.14
PGSC0003DMT400039646	Potato	mitochondrion	38.07	22.64
KRH22000	Soybean	plastid	43.75	22.45
GSMUA_Achr6P14440_001	Banana	nucleus	16.48	16.96
HORVU5Hr1G007780.1	Barley	cytosol	28.98	11.89
HORVU3Hr1G066840.2	Barley	cytosol	27.27	11.27
HORVU5Hr1G092660.2	Barley	nucleus	27.27	10.96
Zm00001d009320_P001	Maize	nucleus	14.2	10.82
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	30.11	10.71
HORVU1Hr1G013210.1	Barley	cytosol	27.27	9.92
HORVU3Hr1G087500.2	Barley	cytosol	25.57	9.02
HORVU1Hr1G079590.12	Barley	cytosol	22.16	8.33
HORVU7Hr1G075720.1	Barley	plasma membrane	23.86	7.69
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	25.0	7.53
HORVU1Hr1G071700.1	Barley	nucleus	20.45	7.0
HORVU3Hr1G089690.1	Barley	cytosol	23.3	6.53

Protein Annotations

EnsemblPlants:HORVU7Hr1G024060.1	EnsemblPlantsGene:HORVU7Hr1G024060	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF93	PFscan:PS50096	SEG:seg
UniParc:UPI000B47D549	UniProt:A0A287VQ93	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:37992782..38000676

Molecular Weight (calculated)

19834.7 Da

IEP (calculated)

11.887

GRAVY (calculated)

-1.011

Length

176 amino acids

Sequence
(BLAST)

001: MGSGDWFKTI ISKKKSKRGK SKHAKKVAAQ RNGANLPQQK PSNAPSSSSD PEDNAALEDW AATRIQNAFR RHKARRTLRC LRGVKRLRIV GQSNPVTKQT
101: SATLSYIQSW NKLQAELRNR RAFMVTEGRN RKKKQENQVK LDAKLQNLQV AWNGGSNTMD EIVARIHLRE GSSSKA

Best Arabidopsis Sequence Match ( AT2G33990.1 )
(BLAST)

001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA

Arabidopsis Description

iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.