Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | KRG93305 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | KRH56614 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | KRG91803 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | KRH34983 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | KRH34984 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67648 | Soybean | nucleus | 95.39 | 95.39 |
| KRH19825 | Soybean | cytosol | 72.33 | 73.4 |
| KRH32420 | Soybean | cytosol | 72.33 | 72.78 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 65.2 | 64.93 |
| PGSC0003DMT400004433 | Potato | cytosol | 62.68 | 62.29 |
| Solyc09g007410.2.1 | Tomato | cytosol | 62.89 | 62.11 |
| Solyc10g084280.1.1 | Tomato | nucleus | 60.17 | 60.04 |
| PGSC0003DMT400027139 | Potato | cytosol | 60.38 | 59.88 |
| PGSC0003DMT400045333 | Potato | cytosol | 58.91 | 59.66 |
| Solyc10g086060.1.1 | Tomato | cytosol | 58.28 | 59.02 |
| GSMUA_Achr10P... | Banana | nucleus | 54.51 | 57.78 |
| CDY11238 | Canola | cytosol, plastid | 48.85 | 56.42 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 55.97 | 55.86 |
| CDX80849 | Canola | cytosol, plastid | 49.48 | 55.4 |
| KRH57858 | Soybean | cytosol | 52.41 | 55.07 |
| CDY55696 | Canola | nucleus, plastid | 49.69 | 54.23 |
| CDY04876 | Canola | nucleus, plastid | 50.31 | 53.93 |
| Bra028854.1-P | Field mustard | nucleus, plastid | 50.1 | 53.71 |
| Os05t0123200-01 | Rice | plasma membrane | 53.25 | 53.59 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 51.78 | 53.58 |
| KXG21175 | Sorghum | cytosol | 53.04 | 53.49 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 53.04 | 52.71 |
| CDY10410 | Canola | cytosol, plastid | 48.85 | 52.48 |
| Zm00001d035492_P009 | Maize | cytosol | 52.2 | 52.31 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 53.04 | 52.27 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 52.2 | 52.09 |
| Zm00001d010975_P003 | Maize | cytosol | 52.2 | 52.09 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 52.41 | 52.08 |
| KRH04761 | Soybean | cytosol | 52.62 | 51.97 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 48.01 | 49.89 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 48.01 | 49.25 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 48.01 | 48.52 |
| Bra009554.1-P | Field mustard | cytosol | 47.8 | 48.41 |
| CDX70333 | Canola | cytosol | 48.64 | 48.33 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 49.06 | 47.18 |
| GSMUA_Achr10P... | Banana | cytosol | 41.51 | 46.92 |
| AT3G09710.2 | Thale cress | nucleus | 45.7 | 46.58 |
| Os01t0833800-01 | Rice | plasma membrane | 48.01 | 45.8 |
| Bra034081.1-P | Field mustard | nucleus | 42.14 | 45.27 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 49.27 | 44.68 |
| KRG91856 | Soybean | cytosol | 45.49 | 44.38 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 46.33 | 44.29 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 46.12 | 44.09 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 46.12 | 44.09 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 46.12 | 44.09 |
| KRH34906 | Soybean | cytosol | 44.44 | 43.89 |
| KXG33651 | Sorghum | cytosol | 45.49 | 43.57 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 48.01 | 43.13 |
| GSMUA_Achr11P... | Banana | mitochondrion | 41.51 | 42.86 |
| Zm00001d042973_P007 | Maize | cytosol | 45.49 | 42.8 |
| Bra001299.1-P | Field mustard | nucleus | 40.67 | 41.01 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 49.27 | 40.24 |
| CDX73992 | Canola | nucleus | 39.83 | 39.83 |
| CDY07937 | Canola | nucleus | 39.2 | 39.12 |
| CDY41307 | Canola | cytosol | 42.35 | 36.93 |
| CDY22198 | Canola | cytosol | 42.35 | 36.14 |
| KRH20344 | Soybean | cytosol | 21.38 | 34.34 |
| KRH50151 | Soybean | cytosol | 20.75 | 34.14 |
| KRH32840 | Soybean | mitochondrion, nucleus | 9.43 | 34.09 |
| KRH21320 | Soybean | cytosol | 21.17 | 33.78 |
| KRH10977 | Soybean | cytosol | 21.17 | 32.79 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 35.85 | 32.33 |
| Os05t0463300-00 | Rice | plasma membrane | 33.33 | 31.67 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 34.59 | 31.67 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 33.96 | 31.52 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 33.75 | 30.49 |
| KRH27315 | Soybean | cytosol | 18.66 | 30.27 |
| KRH22612 | Soybean | cytosol | 26.83 | 30.12 |
| KRH26707 | Soybean | cytosol | 26.62 | 30.09 |
| KRH05433 | Soybean | cytosol | 25.79 | 29.78 |
| KRH15576 | Soybean | cytosol | 25.79 | 29.5 |
| KRH71267 | Soybean | cytosol | 32.7 | 29.16 |
| KRH16503 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 27.88 | 29.04 |
| KRH39086 | Soybean | cytosol | 26.42 | 29.03 |
| KRH64435 | Soybean | nucleus | 28.09 | 28.94 |
| OQU78148 | Sorghum | cytosol | 33.75 | 28.75 |
| KRH55128 | Soybean | mitochondrion, nucleus | 17.82 | 28.72 |
| KRH50198 | Soybean | cytosol | 32.08 | 28.71 |
| KRH53505 | Soybean | cytosol | 26.42 | 28.25 |
| KRH61522 | Soybean | cytosol | 26.21 | 27.78 |
| KRH52206 | Soybean | cytosol | 26.0 | 27.56 |
| KRH37691 | Soybean | mitochondrion | 10.27 | 27.07 |
| KRH22000 | Soybean | plastid | 19.29 | 26.82 |
| KRH47821 | Soybean | nucleus | 30.19 | 26.37 |
| KRH06386 | Soybean | mitochondrion, nucleus | 30.19 | 26.18 |
| KRH23285 | Soybean | nucleus | 21.8 | 25.24 |
| KRH10035 | Soybean | cytosol | 22.01 | 25.24 |
| KRH44124 | Soybean | mitochondrion | 20.96 | 23.75 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.29 | 23.69 |
| KRH47099 | Soybean | cytosol | 21.59 | 22.34 |
Protein Annotations
| EMBL:ACUP02012140 | EnsemblPlants:KRG95941 | EnsemblPlantsGene:GLYMA_19G179000 | EntrezGene:100800080 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | PFAM:PF00612 |
| PFscan:PS50096 | ProteinID:KRG95940.1 | ProteinID:KRG95941 | ProteinID:KRG95941.1 | ProteinID:KRG95942.1 | SEG:seg |
| SMART:SM00015 | UniParc:UPI000233F306 | UniProt:I1NA64 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr19:-:43813772..43818237
Molecular Weight (calculated)
53343.1 Da
IEP (calculated)
10.730
GRAVY (calculated)
-0.831
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKGNWFSS VKKALSPDSK EKKDQKSSKS KKKWFGKQKF ETSVSYSEAD KAPPPPPPIP PPEEIKLTDI EHEISHDHDQ VVEVATAMDA EELVPSVQIE
101: PVRVEAALIA HFAGKPKDEV AAIKIQTAFR GYLARRALRA LRGLVRLKLL MEGPVVKRQA TSTLRSMQTL SRLQSQIRSR RIRMLEENQA LQRQLLQKHA
201: RELESLRMGE EWDDSLQSKE QIEAKLLSKY EATMRRERAL AYAFTHQQNW KNSSRSVNPM FMDPTNPSWG WSWLERWMAA RPWESRSHMD KELNDHSSIR
301: SSSRSITGGE ISKSFARFQL NSEKHSPTAS QNPGSPSFQS TPSKPASSSA KKPKKVSPSP RGSWVMDEDS KSLVSVHSDR FRRHSIAGSS VRDDESLASS
401: PAVPSYMVPT QSAKAKSRTQ SPLASENAKA EKGSFGSAKK RLSFPASPAR PRRHSGPPKV ESSSLNAELA VDKGVDS
101: PVRVEAALIA HFAGKPKDEV AAIKIQTAFR GYLARRALRA LRGLVRLKLL MEGPVVKRQA TSTLRSMQTL SRLQSQIRSR RIRMLEENQA LQRQLLQKHA
201: RELESLRMGE EWDDSLQSKE QIEAKLLSKY EATMRRERAL AYAFTHQQNW KNSSRSVNPM FMDPTNPSWG WSWLERWMAA RPWESRSHMD KELNDHSSIR
301: SSSRSITGGE ISKSFARFQL NSEKHSPTAS QNPGSPSFQS TPSKPASSSA KKPKKVSPSP RGSWVMDEDS KSLVSVHSDR FRRHSIAGSS VRDDESLASS
401: PAVPSYMVPT QSAKAKSRTQ SPLASENAKA EKGSFGSAKK RLSFPASPAR PRRHSGPPKV ESSSLNAELA VDKGVDS
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.