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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 5
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90788 Canola plastid 93.6 94.06
CDY05122 Canola plastid 93.43 93.74
Bra000724.1-P Field mustard plastid 92.78 92.93
CDX94243 Canola cytosol 38.26 85.35
KRH60081 Soybean nucleus 73.89 79.93
KRH41360 Soybean nucleus 75.37 79.41
Solyc08g008460.2.1 Tomato cytosol, nucleus 51.72 79.15
VIT_02s0025g02090.t01 Wine grape plastid 73.56 75.8
PGSC0003DMT400031631 Potato plastid 71.43 72.38
PGSC0003DMT400014982 Potato plastid 71.26 71.74
TraesCS6D01G030400.1 Wheat cytosol 53.69 66.19
GSMUA_Achr10P... Banana cytosol 62.4 65.07
HORVU6Hr1G004990.1 Barley cytosol 56.32 64.84
Zm00001d054069_P001 Maize plasma membrane 61.25 62.79
Os02t0109800-01 Rice plasma membrane 61.08 62.1
TraesCS6B01G037200.1 Wheat plastid 61.41 61.41
EES06120 Sorghum plastid 61.58 61.27
Zm00001d014961_P001 Maize extracellular, mitochondrion, plasma membrane 60.76 60.46
TraesCS6A01G026600.1 Wheat plastid 61.41 54.68
AT3G27960.1 Thale cress cytosol 50.25 46.15
AT1G27500.2 Thale cress cytosol 48.77 44.93
AT2G31240.1 Thale cress mitochondrion 23.81 23.5
Protein Annotations
Gene3D:1.25.40.10MapMan:21.1.1.4.3EntrezGene:826680UniProt:A0A178UXD8ProteinID:AAC33943.1ProteinID:AEE82933.1
ProteinID:AEE82934.1ArrayExpress:AT4G10840EnsemblPlantsGene:AT4G10840RefSeq:AT4G10840TAIR:AT4G10840RefSeq:AT4G10840-TAIR-G
EnsemblPlants:AT4G10840.1TAIR:AT4G10840.1EMBL:AY072170EMBL:AY086489EMBL:AY090361Unigene:At.24477
EMBL:BT000987ProteinID:CAB40052.1ProteinID:CAB81185.1GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005856GO:GO:0005874
GO:GO:0005886GO:GO:0016020InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734RefSeq:NP_192822.1
RefSeq:NP_974530.1UniProt:O81629ProteinID:OAO97331.1PFAM:PF13374PFAM:PF13424PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50005
PFscan:PS50293PANTHER:PTHR19959PANTHER:PTHR19959:SF202SMART:SM00028SUPFAM:SSF48452InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatUniParc:UPI00000ABFAFSEG:seg::
Description
KLCR1Protein KINESIN LIGHT CHAIN-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:O81629]
Coordinates
chr4:+:6656374..6659265
Molecular Weight (calculated)
66284.1 Da
IEP (calculated)
5.132
GRAVY (calculated)
-0.320
Length
609 amino acids
Sequence
(BLAST)
001: MPAMPGLVSV KTPSDTPPLR VAVPDTQPLS NPPRTPMKKT PSSTPSRSKP SPNRSTGKKD SPTVSSSTAA VIDVDDPSLD NPDLGPFLLK LARDAIASGE
101: GPNKALDYAI RATKSFERCC AAVAPPIPGG SDGGPVLDLA MSLHVLAAIY CSLGRFDEAV PPLERAIQVP DPTRGPDHSL AAFSGHMQLG DTLSMLGQID
201: RSIACYEEGL KIQIQTLGDT DPRVGETCRY LAEAYVQAMQ FNKAEELCKK TLEIHRAHSE PASLEEAADR RLMAIICEAK GDYENALEHL VLASMAMIAS
301: GQESEVASID VSIGNIYMSL CRFDEAVFSY QKALTVFKAS KGETHPTVAS VFVRLAELYH RTGKLRESKS YCENALRIYN KPVPGTTVEE IAGGLTEISA
401: IYESVDEPEE ALKLLQKSMK LLEDKPGQQS AIAGLEARMG VMYYTVGRYE DARNAFESAV TKLRAAGEKS AFFGVVLNQM GLACVQLFKI DEAGELFEEA
501: RGILEQERGP CDQDTLGVYS NLAATYDAMG RIEDAIEILE QVLKLREEKL GTANPDFEDE KKRLAELLKE AGRSRNYKAK SLQNLIDPNA RPPKKESSAK
601: KWPSLGFKF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.