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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 6
  • mitochondrion 1
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90788 Canola plastid 98.68 98.84
AT4G10840.1 Thale cress plastid 93.74 93.43
CDX94243 Canola cytosol 38.72 86.08
KRH41360 Soybean nucleus 75.95 79.76
KRH60081 Soybean nucleus 73.97 79.75
Solyc08g008460.2.1 Tomato cytosol, nucleus 51.73 78.89
VIT_02s0025g02090.t01 Wine grape plastid 73.64 75.63
PGSC0003DMT400031631 Potato plastid 71.99 72.71
PGSC0003DMT400014982 Potato plastid 71.66 71.9
TraesCS6D01G030400.1 Wheat cytosol 54.04 66.4
GSMUA_Achr10P... Banana cytosol 62.93 65.41
HORVU6Hr1G004990.1 Barley cytosol 56.51 64.84
Zm00001d054069_P001 Maize plasma membrane 60.79 62.12
Os02t0109800-01 Rice plasma membrane 60.96 61.77
TraesCS6B01G037200.1 Wheat plastid 61.45 61.25
EES06120 Sorghum plastid 61.45 60.95
Zm00001d014961_P001 Maize extracellular, mitochondrion, plasma membrane 60.79 60.29
TraesCS6A01G026600.1 Wheat plastid 61.78 54.82
CDX90092 Canola cytosol, mitochondrion 10.21 49.6
CDY58518 Canola cytosol 51.89 47.95
CDX86457 Canola cytosol 52.22 47.74
CDY27619 Canola nucleus 49.26 45.37
CDY56191 Canola cytosol 50.08 42.7
CDY15411 Canola mitochondrion 24.05 23.97
CDY19069 Canola mitochondrion 23.72 23.38
Protein Annotations
Gene3D:1.25.40.10MapMan:21.1.1.4.3EnsemblPlants:CDY05122ProteinID:CDY05122ProteinID:CDY05122.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00119901001InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734
PFAM:PF13181PFAM:PF13374PFAM:PF13424PFscan:PS50005PFscan:PS50293PANTHER:PTHR19959
PANTHER:PTHR19959:SF202SMART:SM00028SUPFAM:SSF48452InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeat
UniParc:UPI0004EF218DSEG:seg::::
Description
BnaC03g29200D
Coordinates
chrLK031959:+:846131..848890
Molecular Weight (calculated)
65959.9 Da
IEP (calculated)
5.293
GRAVY (calculated)
-0.327
Length
607 amino acids
Sequence
(BLAST)
001: MPTMPGLVSV KTPANAPPLR VSVPDTQQQQ PPRTPMKKTP SSTPSRSKPS PGRSAKKDSP GVSSAAAAVP VVDDPSLDNP DLGPFLLKLA RDAIASGEGP
101: NKALDYAIRA TKSFERCCAA AAPPVPGGSD GGPVLDLAMS LHVLAAIYCS LGRFDEAVPP LERAIKVPDP ERGPDHSLAA FSGHMQLGDT LSMLGQIDRS
201: IACYEEGLKI QIQTLGETDP RVGETCRYLA EAYVQAMQFN KAEELCKKTL EIHRAHSEPA SLEEAADRRL MAIICEAKGD YENALEHLVL ASMAMIASGQ
301: ESEVASIDVS IGNIYMSLCR FDEAVFSYQK ALTVFKSSKG ETHPTVASVF VRLAELYHRT GKLRESKSYC ENALRIYNKP VPGTTVEEIA GGLTEISAIY
401: ESVDEPEEAL KLLQKSMKLL EDKPGQQSAI AGLEARMGVM YYTLGRYEDA RNAFESAVTK LRAAGEKSAF FGVVLNQMGL ACVQLFKIDE AGELFEEARG
501: ILEQERGPCD QDTLGVYSNL AATYDAMGRI EDAIEILEQV LKLREEKLGT ANPDFEDEKK RLAELLKEAG RSRNYKAKSL QNLIDPNARP PKKEASGKKW
601: PGLGFKF
Best Arabidopsis Sequence Match ( AT4G10840.1 )
(BLAST)
001: MPAMPGLVSV KTPSDTPPLR VAVPDTQPLS NPPRTPMKKT PSSTPSRSKP SPNRSTGKKD SPTVSSSTAA VIDVDDPSLD NPDLGPFLLK LARDAIASGE
101: GPNKALDYAI RATKSFERCC AAVAPPIPGG SDGGPVLDLA MSLHVLAAIY CSLGRFDEAV PPLERAIQVP DPTRGPDHSL AAFSGHMQLG DTLSMLGQID
201: RSIACYEEGL KIQIQTLGDT DPRVGETCRY LAEAYVQAMQ FNKAEELCKK TLEIHRAHSE PASLEEAADR RLMAIICEAK GDYENALEHL VLASMAMIAS
301: GQESEVASID VSIGNIYMSL CRFDEAVFSY QKALTVFKAS KGETHPTVAS VFVRLAELYH RTGKLRESKS YCENALRIYN KPVPGTTVEE IAGGLTEISA
401: IYESVDEPEE ALKLLQKSMK LLEDKPGQQS AIAGLEARMG VMYYTVGRYE DARNAFESAV TKLRAAGEKS AFFGVVLNQM GLACVQLFKI DEAGELFEEA
501: RGILEQERGP CDQDTLGVYS NLAATYDAMG RIEDAIEILE QVLKLREEKL GTANPDFEDE KKRLAELLKE AGRSRNYKAK SLQNLIDPNA RPPKKESSAK
601: KWPSLGFKF
Arabidopsis Description
KLCR1Protein KINESIN LIGHT CHAIN-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:O81629]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.