CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021713.1-P	Field mustard	cytosol	81.49	97.86
CDY15411	Canola	mitochondrion	89.61	90.64
AT2G31240.1	Thale cress	mitochondrion	80.68	80.55
VIT_07s0005g03110.t01	Wine grape	mitochondrion	60.71	57.81
KRH32172	Soybean	mitochondrion	57.63	57.72
KRH19545	Soybean	mitochondrion	57.47	57.47
Solyc09g066290.2.1	Tomato	plastid	55.84	53.25
GSMUA_Achr9P23570_001	Banana	mitochondrion	51.95	49.08
EES07769	Sorghum	mitochondrion	47.73	47.73
Os02t0820300-01	Rice	mitochondrion	47.73	47.34
TraesCS6B01G437800.1	Wheat	mitochondrion	47.4	47.33
TraesCS6A01G398000.1	Wheat	mitochondrion	47.4	47.33
Zm00001d051893_P001	Maize	mitochondrion	46.92	46.99
HORVU6Hr1G091620.4	Barley	mitochondrion	43.18	46.26
TraesCS6D01G382300.1	Wheat	mitochondrion	46.1	45.88
PGSC0003DMT400025136	Potato	plastid	56.82	44.7
GSMUA_Achr5P17290_001	Banana	plastid	33.77	41.6
Os03t0149400-01	Rice	mitochondrion	29.71	36.75
TraesCS4A01G415700.1	Wheat	mitochondrion	32.63	36.02
Zm00001d027683_P001	Maize	mitochondrion	33.6	35.81
TraesCS4D01G313100.1	Wheat	mitochondrion	32.31	35.79
EER95495	Sorghum	mitochondrion	32.47	34.97
TraesCS4B01G316500.2	Wheat	mitochondrion	31.98	27.79
CDX90788	Canola	plastid	23.54	23.93
CDX94243	Canola	cytosol	10.55	23.81
CDY05122	Canola	plastid	23.38	23.72
CDY27619	Canola	nucleus	21.92	20.49
CDX90092	Canola	cytosol, mitochondrion	4.06	20.0
CDY56191	Canola	cytosol	22.4	19.38
CDY58518	Canola	cytosol	20.62	19.33
CDX86457	Canola	cytosol	20.78	19.28

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A078G0T5	EnsemblPlants:CDY19069	ProteinID:CDY19069	ProteinID:CDY19069.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00006342001	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	PFAM:PF13181	PFAM:PF13424	PFscan:PS50293	PANTHER:PTHR19959
PANTHER:PTHR19959:SF168	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI0004EE2576	SEG:seg	:	:	:	:

Description

BnaA04g18090DBnaA04g18090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0T5]

Coordinates

chrLK032092:-:122531..124676

Molecular Weight (calculated)

68258.7 Da

IEP (calculated)

6.189

GRAVY (calculated)

-0.354

Length

616 amino acids

Sequence
(BLAST)

001: MKSLSISLIR RLQFHKLKPI PPLLRLNYIS NTTTSSSSSS LLSPPREIST HSKPHPPTLN NNHSFYNPSR NLNTHADDPP ETPIDQEKLD LEEAFESATT
101: TDEMVRLFKQ MELSFEGNEL GLSALKLGLH LDREGDDPET VLSYAAKALR SFDVAANKPN LLTAMALQLM GSANYGLKRF SDGLGYLNRA NRILVKLEKE
201: GDCSVEDVRP VLHAVHLELA NVKNAMGRRE EAIENLKKSL EIKEMAFEEG SKEMGAANRS LADAYVAVLN FNEALPYALK ALEIHKKELG SNSAEVAQDR
301: RVLGVIYSGL EQHDKALEEN RLSQRVLKSW GMKGELIRAE IDAANMKVAL GRYDEAIDVL RKVVEGTEEG SEMRGMVFIS MSKALVNQQK FAEAKRCLEM
401: ACEVLEKKEG CSPVEVAEAY SEVAMQYESM NEFEVAISLL QKTLGILERL PQEQHSEGSV AARIGWLLLF SGRVSQAVPY LESAAERLKE SFGAKHFGVG
501: YVYNNLGAAY LELGRPQSAA QMFAVAKDIM DVSLGPNHVD SIDACQNLSK AYAGMGNYSL AVEFQQQVIK AWNNHGDSAK DELKEAKRLF EELRLKARGG
601: VSTDKVPTKA LPLPKK

Best Arabidopsis Sequence Match ( AT2G31240.1 )
(BLAST)

001: MKSLSISLIR RLHFHKIRPI PLSIHLNAAS SSSSSSSLIS PAREISTSCR RTNDLIKRQF WVNPYRNLNT HVEEPPEISS SDKEKIDLEE AFESANTTDE
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS

Arabidopsis Description

Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.