CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32172	Soybean	mitochondrion	92.37	92.52
VIT_07s0005g03110.t01	Wine grape	mitochondrion	69.97	66.62
Bra021713.1-P	Field mustard	cytosol	54.22	65.11
AT2G31240.1	Thale cress	mitochondrion	61.53	61.43
Solyc09g066290.2.1	Tomato	plastid	63.8	60.84
CDY15411	Canola	mitochondrion	58.93	59.61
CDY19069	Canola	mitochondrion	57.47	57.47
GSMUA_Achr9P23570_001	Banana	mitochondrion	56.49	53.37
EES07769	Sorghum	mitochondrion	50.49	50.49
PGSC0003DMT400025136	Potato	plastid	63.96	50.32
Zm00001d051893_P001	Maize	mitochondrion	49.68	49.76
Os02t0820300-01	Rice	mitochondrion	49.84	49.44
TraesCS6B01G437800.1	Wheat	mitochondrion	48.7	48.62
HORVU6Hr1G091620.4	Barley	mitochondrion	44.81	48.0
TraesCS6A01G398000.1	Wheat	mitochondrion	48.05	47.97
TraesCS6D01G382300.1	Wheat	mitochondrion	46.27	46.04
GSMUA_Achr5P17290_001	Banana	plastid	36.53	45.0
Os03t0149400-01	Rice	mitochondrion	32.63	40.36
EER95495	Sorghum	mitochondrion	37.18	40.03
Zm00001d027683_P001	Maize	mitochondrion	36.85	39.27
TraesCS4D01G313100.1	Wheat	mitochondrion	35.39	39.21
TraesCS4A01G415700.1	Wheat	mitochondrion	35.23	38.89
TraesCS4B01G316500.2	Wheat	mitochondrion	35.71	31.03
KRH41360	Soybean	nucleus	23.7	25.26
KRH60081	Soybean	nucleus	22.73	24.87
KRH06445	Soybean	cytosol	21.59	24.01
KRH56614	Soybean	cytosol	23.7	20.8
KRG93305	Soybean	cytosol	23.38	20.57
KRH63534	Soybean	nucleus	23.21	19.7
KRH54405	Soybean	cytosol	23.38	19.12
KRH03299	Soybean	cytosol	12.01	18.55
KRH57064	Soybean	cytosol	21.43	18.08

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100783720	MapMan:35.1	EMBL:ACUP02008183	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G122300
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1LYJ0	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	EnsemblPlants:KRH19545	ProteinID:KRH19545	ProteinID:KRH19545.1	PFAM:PF13374	PFAM:PF13424
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR19959	PANTHER:PTHR19959:SF168	SMART:SM00028	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000233C06A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:23516555..23520162

Molecular Weight (calculated)

69000.8 Da

IEP (calculated)

6.104

GRAVY (calculated)

-0.369

Length

616 amino acids

Sequence
(BLAST)

001: MRKLWNSLSL LARRRSTFSF SKSYSSDAPF NRCTKTHGLL IRPNNKFATT PFRNMETLVQ KSSPIPSRQR KIMEKSQLDE AFESAETTEE MLKVFSNMEG
101: VFDERELGLA SLKIGLKLDH EGEDPEKALS FANRALKALE KDNNNNNFPS SLPVAMCLQL LGSVSFSLKR FSDSLGYLNR ANRVLGRLQD EGGVSVDDVR
201: PVLHAVQLEL SNVKNAVGRR EEALENLRKC LEIKEMTFEE DSGELGKGNR DLAEAYVAVL NFKEALPYCL KALEIHMKRL GMNSVEVAHD RKLLGIVYSG
301: LEEHEKALEQ NVLAQRILKN WNLNADLLRA EIDAANMMIA LGRYDEAVGT LKGVVQQTEK DSETQALVLV SMAKALCNQE KFVDCKRCLE VSLGILDKRE
401: RICPVEVAEA YSEISMQYET MNEFETAISL LKRTLALLEK QPQEQHSEGS VSARIGWLLL LTGKVQQAIP YLESAAERLK DSFGPKHFGV GYIYNNLGAA
501: YLELDRPQSA AQMFAVAKDI MDTSLGPHHA DTIEACQNLS KAYGEMGSYV LAIEFQQQVV DAWESHGASA EDELREGQRL LDQLKKKARD ASANELHMKA
601: LPNELPMKAL PLPHKS

Best Arabidopsis Sequence Match ( AT2G31240.1 )
(BLAST)

001: MKSLSISLIR RLHFHKIRPI PLSIHLNAAS SSSSSSSLIS PAREISTSCR RTNDLIKRQF WVNPYRNLNT HVEEPPEISS SDKEKIDLEE AFESANTTDE
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS

Arabidopsis Description

Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.