CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19545	Soybean	mitochondrion	92.52	92.37
Bra021713.1-P	Field mustard	cytosol	54.47	65.3
VIT_07s0005g03110.t01	Wine grape	mitochondrion	68.46	65.07
AT2G31240.1	Thale cress	mitochondrion	61.3	61.1
Solyc09g066290.2.1	Tomato	plastid	63.74	60.68
CDY15411	Canola	mitochondrion	59.35	59.93
CDY19069	Canola	mitochondrion	57.72	57.63
GSMUA_Achr9P23570_001	Banana	mitochondrion	56.91	53.68
EES07769	Sorghum	mitochondrion	50.73	50.65
PGSC0003DMT400025136	Potato	plastid	63.9	50.19
Zm00001d051893_P001	Maize	mitochondrion	50.08	50.08
Os02t0820300-01	Rice	mitochondrion	50.41	49.92
TraesCS6B01G437800.1	Wheat	mitochondrion	49.27	49.11
TraesCS6A01G398000.1	Wheat	mitochondrion	48.62	48.46
HORVU6Hr1G091620.4	Barley	mitochondrion	45.2	48.35
TraesCS6D01G382300.1	Wheat	mitochondrion	46.67	46.37
GSMUA_Achr5P17290_001	Banana	plastid	36.91	45.4
Os03t0149400-01	Rice	mitochondrion	33.17	40.96
EER95495	Sorghum	mitochondrion	37.72	40.56
Zm00001d027683_P001	Maize	mitochondrion	37.72	40.14
TraesCS4D01G313100.1	Wheat	mitochondrion	35.77	39.57
TraesCS4A01G415700.1	Wheat	mitochondrion	35.77	39.43
TraesCS4B01G316500.2	Wheat	mitochondrion	36.26	31.45
KRH41360	Soybean	nucleus	24.72	26.3
KRH60081	Soybean	nucleus	23.58	25.75
KRH06445	Soybean	cytosol	22.11	24.55
KRH56614	Soybean	cytosol	24.55	21.51
KRG93305	Soybean	cytosol	24.39	21.43
KRH63534	Soybean	nucleus	23.74	20.11
KRH54405	Soybean	cytosol	23.9	19.52
KRH03299	Soybean	cytosol	12.2	18.8
KRH57064	Soybean	cytosol	21.3	17.95

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100779878	MapMan:35.1	UniProt:A0A0R0HNZ6	EMBL:ACUP02006099	ncoils:Coil
EnsemblPlantsGene:GLYMA_10G035900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	EnsemblPlants:KRH32172	ProteinID:KRH32172	ProteinID:KRH32172.1	PFAM:PF13374	PFAM:PF13424
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR19959	PANTHER:PTHR19959:SF168	SMART:SM00028	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000233C95E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:3139729..3143545

Molecular Weight (calculated)

68746.7 Da

IEP (calculated)

6.225

GRAVY (calculated)

-0.302

Length

615 amino acids

Sequence
(BLAST)

001: MRKLWNSLSL VGRRRSISYF SKSYTSDAPF NCCTKTHGLL IRPNNKFATT PFRNMDTLVQ KPSPIPSRQR KIMGKSQLEE AFESAETTEE MLKAFSNMEG
101: VFEERELGLA SLKIGLKLDH EGEDPEKALS FAKRALKALE KDNNNNTPSS LPVAMCLQLL GSVSFSLKRF SDSLGYLNRA NRVLARLQDV GVVSVYDVRP
201: VLHAVQLELA NVKNAMGRRE EALENLRKCL EIKEVTFEED SGELGKGNRD LAEAYVAVLN FKEALPYCLK ALEIHIKGLG MNSVEVAHDR KLLGIVYSGL
301: EEHEKALEQN VLAQRILKNW NLNADLLRAE IDAANMMIAL GRYDEAVCTL KGVVQQTEKD SETRALVLVS MAKALCNQEK FVDCKSCLEV SLGILDKRER
401: ISPVEVAEAY SEISMQYETM NEFETAISLL KRTLALLEMQ PQEQHSEGSI SARIGWLLLL TGKVQQAIPY LESAAERLKD SFGPKHFGVG YIYNNLGAAY
501: LELDRPQSAA QMFAVAKDIM DTSLGPHHAD TIESCQNLSK AYGEMGSYVL AIEFQQQVVD AWESHGASAE DEFREAQRLL EQLKKKARDA SANELHMKAL
601: PNELPIKALP LPHKS

Best Arabidopsis Sequence Match ( AT2G31240.1 )
(BLAST)

001: MKSLSISLIR RLHFHKIRPI PLSIHLNAAS SSSSSSSLIS PAREISTSCR RTNDLIKRQF WVNPYRNLNT HVEEPPEISS SDKEKIDLEE AFESANTTDE
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS

Arabidopsis Description

Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.