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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G398000.1 Wheat mitochondrion 91.13 84.93
TraesCS6B01G437800.1 Wheat mitochondrion 90.61 84.44
TraesCS6D01G382300.1 Wheat mitochondrion 79.13 73.51
Os02t0820300-01 Rice mitochondrion 73.57 68.12
EES07769 Sorghum mitochondrion 72.87 68.02
Zm00001d051893_P001 Maize mitochondrion 71.65 66.99
Bra021713.1-P Field mustard cytosol 44.52 49.9
GSMUA_Achr9P23570_001 Banana mitochondrion 56.35 49.69
KRH32172 Soybean mitochondrion 48.35 45.2
VIT_07s0005g03110.t01 Wine grape mitochondrion 50.61 44.98
KRH19545 Soybean mitochondrion 48.0 44.81
AT2G31240.1 Thale cress mitochondrion 46.43 43.27
CDY15411 Canola mitochondrion 45.74 43.19
CDY19069 Canola mitochondrion 46.26 43.18
Solyc09g066290.2.1 Tomato plastid 47.13 41.95
PGSC0003DMT400025136 Potato plastid 48.17 35.38
HORVU6Hr1G004990.1 Barley cytosol 21.22 23.06
HORVU6Hr1G069310.1 Barley cytosol 21.39 17.37
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1UniProt:A0A287V6S0GO:GO:0003674GO:GO:0005488GO:GO:0005515
EnsemblPlantsGene:HORVU6Hr1G091620EnsemblPlants:HORVU6Hr1G091620.4InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734PFAM:PF13374
PFAM:PF13424PFscan:PS50005PFscan:PS50293PANTHER:PTHR19959PANTHER:PTHR19959:SF168SMART:SM00028
SUPFAM:SSF48452InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatUniParc:UPI000B47D9B6SEG:seg
Description
No Description!
Coordinates
chrchr6H:-:575956037..575958038
Molecular Weight (calculated)
62504.2 Da
IEP (calculated)
6.426
GRAVY (calculated)
-0.079
Length
575 amino acids
Sequence
(BLAST)
001: MALRRAASLV LRQRIRTLAP APSPKHLNLL PPLPHPRRHY SPRPPPALPA SARVLAEAAE EAFEAASTTT DLFAAFSRLE NAVSPTDKRL ALACLKLGQH
101: LDSSASADPS RVLELALRSV GILEAAAPRS SEPSSDSDAV SLAMALHLAG SASLDLTRFH DALSFLSRSL RLLTPLLPAK DAAVGDEGGD PDAEGFDVRP
201: VAHAVRLQLA NVKTALGRRE EALADLRASV ELKESILPPG SRELGAAYRD LAEAHASVLD FKQALPFCQK ALELHESALG KNSVELAHDR RLLGVIYTGL
301: EQHELALEQN EMSQKVMKKW GVAGADLIHA EIDAANIKIA LGKFHEAVSV LKDVAKKVEK DSDVRALVFI SMAKALANQE RVGDTKRCLE IACGILEKKE
401: VSEPDKVAEA YIEVSSLYEM VNEFDKAISL MKRSLGMLER IPQSQHLEGN VAAKIGWLLL LTGKVTEAVP YLEDAVERMK ESFGPKHYGV GYVYNNLGAA
501: YMEMDRPQSA AQMFALAKEV MDVSLGPHHS DTIETCQSLA NAYNTMGRYY FCSLFMVVHS NTNMISVSLV ENSVV
Best Arabidopsis Sequence Match ( AT2G31240.1 )
(BLAST)
001: MKSLSISLIR RLHFHKIRPI PLSIHLNAAS SSSSSSSLIS PAREISTSCR RTNDLIKRQF WVNPYRNLNT HVEEPPEISS SDKEKIDLEE AFESANTTDE
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS
Arabidopsis Description
Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.