CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051893_P001	Maize	mitochondrion	91.88	92.03
Os02t0820300-01	Rice	mitochondrion	79.55	78.91
TraesCS6B01G437800.1	Wheat	mitochondrion	75.32	75.2
TraesCS6A01G398000.1	Wheat	mitochondrion	74.84	74.72
HORVU6Hr1G091620.4	Barley	mitochondrion	68.02	72.87
TraesCS6D01G382300.1	Wheat	mitochondrion	70.94	70.6
Bra021713.1-P	Field mustard	cytosol	45.45	54.58
GSMUA_Achr9P23570_001	Banana	mitochondrion	57.47	54.29
KRH32172	Soybean	mitochondrion	50.65	50.73
KRH19545	Soybean	mitochondrion	50.49	50.49
VIT_07s0005g03110.t01	Wine grape	mitochondrion	51.95	49.46
AT2G31240.1	Thale cress	mitochondrion	48.38	48.3
CDY19069	Canola	mitochondrion	47.73	47.73
CDY15411	Canola	mitochondrion	46.92	47.45
Solyc09g066290.2.1	Tomato	plastid	48.86	46.59
EER95495	Sorghum	mitochondrion	36.69	39.51
PGSC0003DMT400025136	Potato	plastid	49.19	38.7
EES06120	Sorghum	plastid	22.24	22.39
EES05647	Sorghum	cytosol	22.24	19.21

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:8059694	UniProt:C5XVZ6	ncoils:Coil	EnsemblPlants:EES07769
ProteinID:EES07769	ProteinID:EES07769.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	ProteinID:OQU85968.1	PFAM:PF13374	PFAM:PF13424	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR19959	PANTHER:PTHR19959:SF168	SMART:SM00028	EnsemblPlantsGene:SORBI_3004G348600	SUPFAM:SSF48452
unigene:Sbi.20643	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0001A860EF	RefSeq:XP_002454793.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:67759900..67763284

Molecular Weight (calculated)

66722.2 Da

IEP (calculated)

6.408

GRAVY (calculated)

-0.139

Length

616 amino acids

Sequence
(BLAST)

001: MALRRAASVL LRTRLRAPVT SLPRKALINP LLAPPRRHFS PRPPPPVPAA AAAVADAAEE AFEAARSTND MLAAFSRLEG AVPANDKRLA LACLKLGQHL
101: EASGSADASR VLALALRCLG ILEASPNAST PASASASDAV SLAMALHLAG SASFDLSRFH DALSLLSRAQ RLLAPLLPDE GVAFGAGEEP GGFDVRPVAH
201: AVRLQLANVK TALGRREEAL ADMRACLDLK ESILPPGSRE LGVAYRDLAE AYATLLDFKQ ALPFCQKALK LHESTLGKNS VEVAHDRRLL GVIYTGLEQH
301: EQALEQNEIS QKVMKSWGAA GSDLLHAEID AANIKIALGK FDEAVSVLKN VAKQVEKDNE MRALVFISMA KALANQEKVG DTKRCLEIAC DILEKKEFAT
401: PDKVAEMYTE VSSLYEMVNE FEKAISLLKR GLGMLERIPQ AQHLEGNVAA RIGWLLLFTG KVTEAVPYLE DAVERMKDSF GPKHYGVGYV YNNLGAAYME
501: MDRPQSAAQM FALAKEVMDV SLGPHHSDTI EACQSLAKAY DAMGSYPLAM EFQKRVVDSW RNHGADARDE LKEAMRLYNQ IKAKALACLS PEGSANALPE
601: PQEQETDSDT AKAVQR

Best Arabidopsis Sequence Match ( AT2G31240.1 )
(BLAST)

001: MKSLSISLIR RLHFHKIRPI PLSIHLNAAS SSSSSSSLIS PAREISTSCR RTNDLIKRQF WVNPYRNLNT HVEEPPEISS SDKEKIDLEE AFESANTTDE
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS

Arabidopsis Description

Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.