Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021713.1-P | Field mustard | cytosol | 46.63 | 59.26 |
| EES07769 | Sorghum | mitochondrion | 54.29 | 57.47 |
| VIT_07s0005g03110.t01 | Wine grape | mitochondrion | 56.9 | 57.34 |
| KRH32172 | Soybean | mitochondrion | 53.68 | 56.91 |
| Zm00001d051893_P001 | Maize | mitochondrion | 53.37 | 56.59 |
| KRH19545 | Soybean | mitochondrion | 53.37 | 56.49 |
| Os02t0820300-01 | Rice | mitochondrion | 53.68 | 56.36 |
| HORVU6Hr1G091620.4 | Barley | mitochondrion | 49.69 | 56.35 |
| TraesCS6A01G398000.1 | Wheat | mitochondrion | 53.22 | 56.24 |
| TraesCS6B01G437800.1 | Wheat | mitochondrion | 53.22 | 56.24 |
| TraesCS6D01G382300.1 | Wheat | mitochondrion | 51.23 | 53.96 |
| AT2G31240.1 | Thale cress | mitochondrion | 50.77 | 53.65 |
| Solyc09g066290.2.1 | Tomato | plastid | 52.91 | 53.41 |
| CDY15411 | Canola | mitochondrion | 49.39 | 52.87 |
| CDY19069 | Canola | mitochondrion | 49.08 | 51.95 |
| GSMUA_Achr5P17290_001 | Banana | plastid | 36.5 | 47.6 |
| PGSC0003DMT400025136 | Potato | plastid | 53.37 | 44.44 |
| GSMUA_Achr10P... | Banana | cytosol | 20.71 | 23.12 |
| GSMUA_Achr10P... | Banana | cytosol | 21.32 | 21.06 |
| GSMUA_Achr2P09630_001 | Banana | nucleus | 22.24 | 20.28 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSMUA_Achr9G23570_001 | EnsemblPlants:GSMUA_Achr9P23570_001 | EnsemblPlants:GSMUA_Achr9T23570_001 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| UniProt:M0U2W4 | PFAM:PF13374 | PFAM:PF13424 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR19959 |
| PANTHER:PTHR19959:SF168 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI0002968174 | SEG:seg | : | : | : | : |
Description
tetratricopeptide repeat containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G23570_001]
Coordinates
chr9:+:28403707..28409857
Molecular Weight (calculated)
71887.2 Da
IEP (calculated)
7.042
GRAVY (calculated)
-0.255
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFRALLTLK ARYRMRDRLQ TVLTGGRVSL GFAGSQYLSA MRRAAALVFS AFATKRRPSS RNLSRLLHGS PSLPHSPRPI SSQRCPSRAL QTVPDAAVPL
101: PSHRRRRPND VADLEETFEA ASTTDDILSG FRALEASLDP GDKRLGLACL KVGQHLDSIG SEDHEKVLTF GLRALRILDV DGGSSISVVM ALHLVGSASY
201: NLKRFNDSLG FLNRGNRILN TLESEGIDGE FDVRPVSHAV QLQLANTKTA MGRREEALVN LRRCLDLKVS ILEPDSRELG TAHRDLAEAY AAVLNFKEAL
301: PLCLKALDIH KEQLGQNSVE VAHDRRLLGV IYTGLEEHDK ALEQNQLSQK ILKSWGVGGS DLLNAKIDAA NIHIALGKYD EAINALKGVV EQTDSESEMR
401: ALVFVSMAKA LCNQNKFPDA KRCLEISCGI LEKKESVSPE KVAEAYMEIS SLYESMNDFE TAICLLKRSL AMVEKIPQEQ HVEGNVLAKI GWLLLLTGKV
501: AQGIPYLESA VERMKESFGP KHFGVGYIYN NLGAAYMEMD RPQSAAQMFA LAKDIMDVSL GPHHADSIET YQSLANAYKT MGSYTLALEF QQRVVDAWRS
601: HGSNAKDELE EAAKHLEELK KKAFGSLTEE VIQEALSLAS RNDSVPSKDV QH
101: PSHRRRRPND VADLEETFEA ASTTDDILSG FRALEASLDP GDKRLGLACL KVGQHLDSIG SEDHEKVLTF GLRALRILDV DGGSSISVVM ALHLVGSASY
201: NLKRFNDSLG FLNRGNRILN TLESEGIDGE FDVRPVSHAV QLQLANTKTA MGRREEALVN LRRCLDLKVS ILEPDSRELG TAHRDLAEAY AAVLNFKEAL
301: PLCLKALDIH KEQLGQNSVE VAHDRRLLGV IYTGLEEHDK ALEQNQLSQK ILKSWGVGGS DLLNAKIDAA NIHIALGKYD EAINALKGVV EQTDSESEMR
401: ALVFVSMAKA LCNQNKFPDA KRCLEISCGI LEKKESVSPE KVAEAYMEIS SLYESMNDFE TAICLLKRSL AMVEKIPQEQ HVEGNVLAKI GWLLLLTGKV
501: AQGIPYLESA VERMKESFGP KHFGVGYIYN NLGAAYMEMD RPQSAAQMFA LAKDIMDVSL GPHHADSIET YQSLANAYKT MGSYTLALEF QQRVVDAWRS
601: HGSNAKDELE EAAKHLEELK KKAFGSLTEE VIQEALSLAS RNDSVPSKDV QH
001: MKSLSISLIR RLHFHKIRPI PLSIHLNAAS SSSSSSSLIS PAREISTSCR RTNDLIKRQF WVNPYRNLNT HVEEPPEISS SDKEKIDLEE AFESANTTDE
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS
Arabidopsis Description
Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.