Factsheet for Bra021713.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19069	Canola	mitochondrion	97.86	81.49
AT2G31240.1	Thale cress	mitochondrion	88.89	73.91
VIT_07s0005g03110.t01	Wine grape	mitochondrion	69.98	55.49
KRH32172	Soybean	mitochondrion	65.3	54.47
KRH19545	Soybean	mitochondrion	65.11	54.22
Solyc09g066290.2.1	Tomato	plastid	63.16	50.15
GSMUA_Achr9P23570_001	Banana	mitochondrion	59.26	46.63
EES07769	Sorghum	mitochondrion	54.58	45.45
Os02t0820300-01	Rice	mitochondrion	54.97	45.41
TraesCS6B01G437800.1	Wheat	mitochondrion	54.58	45.38
TraesCS6A01G398000.1	Wheat	mitochondrion	54.58	45.38
Zm00001d051893_P001	Maize	mitochondrion	54.39	45.37
TraesCS6D01G382300.1	Wheat	mitochondrion	54.19	44.91
HORVU6Hr1G091620.4	Barley	mitochondrion	49.9	44.52
PGSC0003DMT400025136	Potato	plastid	64.13	42.02
GSMUA_Achr5P17290_001	Banana	plastid	38.6	39.6
Os03t0149400-01	Rice	mitochondrion	35.28	36.35
TraesCS4A01G415700.1	Wheat	mitochondrion	38.6	35.48
Zm00001d027683_P001	Maize	mitochondrion	39.38	34.95
TraesCS4D01G313100.1	Wheat	mitochondrion	37.82	34.89
EER95495	Sorghum	mitochondrion	38.79	34.79
TraesCS4B01G316500.2	Wheat	mitochondrion	37.43	27.08
Bra000724.1-P	Field mustard	plastid	26.51	22.37
Bra032832.1-P	Field mustard	nucleus	25.15	19.58
Bra025315.1-P	Field mustard	cytosol	23.98	18.52

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EnsemblPlantsGene:Bra021713	EnsemblPlants:Bra021713.1	EnsemblPlants:Bra021713.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
UniProt:M4DYW6	PFAM:PF13181	PFAM:PF13424	PFscan:PS50293	PANTHER:PTHR19959	PANTHER:PTHR19959:SF168
SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002544B7C
SEG:seg	:	:	:	:	:

Description

AT2G31240 (E=2e-253) | tetratricopeptide repeat (TPR)-containing protein

Coordinates

chrA04:-:14054728..14056350

Molecular Weight (calculated)

56741.3 Da

IEP (calculated)

5.938

GRAVY (calculated)

-0.272

Length

513 amino acids

Sequence
(BLAST)

001: MVRLFKQMEL SFEGNELGLS ALKLGLHLDR EGDDPETVLS YATKALRSFD VAANKPNLLT AMALQLMGSA NYGLKRFSDG LGYLNRANRI LVKLEKEGDC
101: SVEDVRPVLH AVHLELANVK NAMGRREEAI ENLKKSLEIK EMAFEEGSKE MGAANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGSNS AEVAQDRRVL
201: GVIYSGLEQH DKALEENRLS QRVLKNWGMK GELIRAEIDA ANMKVALGRY DEAIDVLRRV VEGTDEGSEM RGMVFISMSK ALVNQQKFAE AKRCLEMACE
301: VLEKKEGCSP VEVAEAYSEV AMQYESMNEF EVAISLLQKT LGILERLPQE QHSEGSVAAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
401: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQQVIKAWN NHGDSAKDEL KEAKRLFEEL RLKARGGVST
501: DKVPTKALPL PKK

Best Arabidopsis Sequence Match ( AT2G31240.1 )
(BLAST)

001: MKSLSISLIR RLHFHKIRPI PLSIHLNAAS SSSSSSSLIS PAREISTSCR RTNDLIKRQF WVNPYRNLNT HVEEPPEISS SDKEKIDLEE AFESANTTDE
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS

Arabidopsis Description

Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.