Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G415700.1 | Wheat | mitochondrion | 84.89 | 84.59 |
| TraesCS4B01G316500.2 | Wheat | mitochondrion | 90.65 | 71.09 |
| Os03t0149400-01 | Rice | mitochondrion | 55.22 | 61.65 |
| EER95495 | Sorghum | mitochondrion | 63.31 | 61.54 |
| Zm00001d027683_P001 | Maize | mitochondrion | 61.15 | 58.82 |
| GSMUA_Achr5P17290_001 | Banana | plastid | 35.61 | 39.6 |
| Bra021713.1-P | Field mustard | cytosol | 34.89 | 37.82 |
| KRH32172 | Soybean | mitochondrion | 39.57 | 35.77 |
| TraesCS6D01G382300.1 | Wheat | mitochondrion | 39.75 | 35.7 |
| KRH19545 | Soybean | mitochondrion | 39.21 | 35.39 |
| VIT_07s0005g03110.t01 | Wine grape | mitochondrion | 41.01 | 35.24 |
| AT2G31240.1 | Thale cress | mitochondrion | 36.69 | 33.06 |
| CDY15411 | Canola | mitochondrion | 35.61 | 32.51 |
| CDY19069 | Canola | mitochondrion | 35.79 | 32.31 |
| Solyc09g066290.2.1 | Tomato | plastid | 37.23 | 32.04 |
| PGSC0003DMT400025136 | Potato | plastid | 38.13 | 27.08 |
| TraesCS6D01G030400.1 | Wheat | cytosol | 18.88 | 21.26 |
| TraesCS6D01G254800.1 | Wheat | cytosol | 19.78 | 15.49 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G313100.1 | EnsemblPlantsGene:TraesCS4D01G313100 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR019734 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | ncoils:Coil | PANTHER:PTHR19959 |
| PANTHER:PTHR19959:SF168 | SEG:seg | SMART:SM00028 | SUPFAM:SSF48452 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4D:+:479363047..479366348
Molecular Weight (calculated)
60146.5 Da
IEP (calculated)
6.893
GRAVY (calculated)
-0.173
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRLHRSLLL AARSSPLARH RPPPPLPLHR PPPPRPHRPL PFSTAALPTX XXPDAAPTAQ PAADALAALE AAERQESSGD HQKALDLALK VLGPLQESRG
101: GWSLPVARAL RLAGAAACRL GSLTDSLDSL EAAAEIVGSL QGGGAEAATV GAAVHEQLAR TKTAIGRRWD AVASFQRALE LKCRFLNAGS AELGDAYRDA
201: AEAYEGVLCF DKALPLCLKA LEIAEKRSGE GSAEAAKVRR ILVVAYTGMG RNEEALEQNE LVRMEYERLG LDAELSLVEI DGASLRILLG RTEDAMNDLK
301: KVMKRASKES EERALAFVAM AKILCSEDRS SDSTRCLEIA RETLDAKRSV NTERVAGAYT EISMLYESMN EFEMSLCLMK KTLVFLEGAS GMQHIQGSIS
401: ARMGFLLLLT KRIDESVPFL EKAIEKLKNC FGPLHFGLGF AYKHLGKAYI EMGQPESSLK FFGLASDIIN AAFGPKHEDS IEIIQCIANA YGLMGSYKYA
501: MDFQQRVIDA YESCGPGSAY EIREAHRLLE QIRKKAEGSP SAVFPANSLP VLPENR
101: GWSLPVARAL RLAGAAACRL GSLTDSLDSL EAAAEIVGSL QGGGAEAATV GAAVHEQLAR TKTAIGRRWD AVASFQRALE LKCRFLNAGS AELGDAYRDA
201: AEAYEGVLCF DKALPLCLKA LEIAEKRSGE GSAEAAKVRR ILVVAYTGMG RNEEALEQNE LVRMEYERLG LDAELSLVEI DGASLRILLG RTEDAMNDLK
301: KVMKRASKES EERALAFVAM AKILCSEDRS SDSTRCLEIA RETLDAKRSV NTERVAGAYT EISMLYESMN EFEMSLCLMK KTLVFLEGAS GMQHIQGSIS
401: ARMGFLLLLT KRIDESVPFL EKAIEKLKNC FGPLHFGLGF AYKHLGKAYI EMGQPESSLK FFGLASDIIN AAFGPKHEDS IEIIQCIANA YGLMGSYKYA
501: MDFQQRVIDA YESCGPGSAY EIREAHRLLE QIRKKAEGSP SAVFPANSLP VLPENR
001: MKSLSISLIR RLHFHKIRPI PLSIHLNAAS SSSSSSSLIS PAREISTSCR RTNDLIKRQF WVNPYRNLNT HVEEPPEISS SDKEKIDLEE AFESANTTDE
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS
Arabidopsis Description
Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.