CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027683_P001	Maize	mitochondrion	76.57	75.78
TraesCS4D01G313100.1	Wheat	mitochondrion	61.54	63.31
Os03t0149400-01	Rice	mitochondrion	54.55	62.65
TraesCS4A01G415700.1	Wheat	mitochondrion	59.09	60.57
TraesCS4B01G316500.2	Wheat	mitochondrion	62.24	50.21
GSMUA_Achr5P17290_001	Banana	plastid	37.24	42.6
Bra021713.1-P	Field mustard	cytosol	34.79	38.79
KRH32172	Soybean	mitochondrion	40.56	37.72
KRH19545	Soybean	mitochondrion	40.03	37.18
EES07769	Sorghum	mitochondrion	39.51	36.69
VIT_07s0005g03110.t01	Wine grape	mitochondrion	41.43	36.63
AT2G31240.1	Thale cress	mitochondrion	35.84	33.23
CDY15411	Canola	mitochondrion	35.14	33.0
Solyc09g066290.2.1	Tomato	plastid	36.71	32.51
CDY19069	Canola	mitochondrion	34.97	32.47
PGSC0003DMT400025136	Potato	plastid	37.59	27.46
EES06120	Sorghum	plastid	21.33	19.93
EES05647	Sorghum	cytosol	20.63	16.55

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:8085474	UniProt:C5WXW5	ncoils:Coil	EnsemblPlants:EER95495
ProteinID:EER95495	ProteinID:EER95495.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR019734	PFAM:PF13424	PANTHER:PTHR19959	PANTHER:PTHR19959:SF168	SMART:SM00028	EnsemblPlantsGene:SORBI_3001G502600
SUPFAM:SSF48452	unigene:Sbi.9508	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0001A83061	RefSeq:XP_002468497.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:77117722..77124494

Molecular Weight (calculated)

62332.0 Da

IEP (calculated)

5.548

GRAVY (calculated)

-0.171

Length

572 amino acids

Sequence
(BLAST)

001: MRRLPKSLLL ACLSRPLRHR PPLPLLHPSP PQPPRPGARL LPFSTQTLAP APPPPPAPDA ASTAEPAGLA LLEAAERRES EGDHQEALAL ALKALAPLQA
101: SHGGWSLPVA RALRLAGTAA TRAGSLSDAL ESLGAAAEIV DYLAPARREG VPKEVAAVGA TVYEQLARAK TAMGHRWDAV GDLQRALDLK LQCLEGGSAE
201: LGDAYRDVAE AYAGVLDFDK ALPLCSTALG IAEGRFGEDS AEVAKLRRLL MAVYTGLGRH VEALEQIDLA KMVYERLGLN VELSQAEIDG ANIRILLGRS
301: EEAMNDIKRV MQRSDKESEE RALAYVTMAK ILISEERVSD SKRCLEIARG IIDAMDSIDP GRFAEVYAEM SMLYESMTQF EMPLSALDMS LSLMKKTLAV
401: LESAKEMHHI EGSISARMGW LLLHTQKADE SVPYLERAVD KLKNCFGPRH FGLGFAYKNL GQAYLEMDQH QSAVKFYKLA NDIIEAAFGL THEDSIDTKQ
501: SLANAYGLMG SYKLAIDFQE QVVDAYSRCG SGAFEDLREA NRLLEQLKKK AQGLPHAVFP AYSLPVLPEN ND

Best Arabidopsis Sequence Match ( AT2G31240.1 )
(BLAST)

001: MKSLSISLIR RLHFHKIRPI PLSIHLNAAS SSSSSSSLIS PAREISTSCR RTNDLIKRQF WVNPYRNLNT HVEEPPEISS SDKEKIDLEE AFESANTTDE
101: MVRLFKEMEL SFEGNELGLS ALKLGLHLDR EGEDPEKVLS YADKALKSFD GDGNKPNLLV AMASQLMGSA NYGLKRFSDS LGYLNRANRI LVKLEADGDC
201: VVEDVRPVLH AVQLELANVK NAMGRREEAI ENLKKSLEIK EMTFDEDSKE MGVANRSLAD AYVAVLNFNE ALPYALKALE IHKKELGNNS AEVAQDRRLL
301: GVIYSGLEQH DKALEQNRLS QRVLKNWGMK LELIRAEIDA ANMKVALGKY EEAIDILKSV VQQTDKDSEM RAMVFISMSK ALVNQQKFAE SKRCLEFACE
401: ILEKKETALP VEVAEAYSEV AMQYESMNEF ETAISLLQKT LGILEKLPQE QHSEGSVSAR IGWLLLFSGR VSQAVPYLES AAERLKESFG AKHFGVGYVY
501: NNLGAAYLEL GRPQSAAQMF AVAKDIMDVS LGPNHVDSID ACQNLSKAYA GMGNYSLAVE FQQRVINAWD NHGDSAKDEM KEAKRLLEDL RLKARGGVST
601: NKLLNKALPL PKPSHSS

Arabidopsis Description

Putative kinesin light chain [Source:UniProtKB/TrEMBL;Acc:Q8VZQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.