Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G030400.1 | Wheat | cytosol | 88.47 | 94.74 |
| TraesCS6B01G037200.1 | Wheat | plastid | 96.03 | 83.42 |
| Os02t0109800-01 | Rice | plasma membrane | 91.12 | 80.47 |
| Zm00001d054069_P001 | Maize | plasma membrane | 89.79 | 79.97 |
| EES06120 | Sorghum | plastid | 89.41 | 77.29 |
| Zm00001d014961_P001 | Maize | extracellular, mitochondrion, plasma membrane | 89.22 | 77.12 |
| TraesCS6A01G026600.1 | Wheat | plastid | 96.03 | 74.27 |
| Solyc08g008460.2.1 | Tomato | cytosol, nucleus | 55.2 | 73.37 |
| CDX94243 | Canola | cytosol | 34.97 | 67.77 |
| GSMUA_Achr10P... | Banana | cytosol | 71.83 | 65.07 |
| KRH60081 | Soybean | nucleus | 68.43 | 64.3 |
| KRH41360 | Soybean | nucleus | 68.43 | 62.63 |
| KRH06445 | Soybean | cytosol | 62.95 | 60.11 |
| VIT_15s0046g00220.t01 | Wine grape | cytosol, plastid | 66.54 | 59.06 |
| PGSC0003DMT400031631 | Potato | plastid | 66.73 | 58.74 |
| VIT_02s0025g02090.t01 | Wine grape | plastid | 65.22 | 58.38 |
| PGSC0003DMT400014982 | Potato | plastid | 66.35 | 58.02 |
| CDX90788 | Canola | plastid | 64.84 | 56.6 |
| CDY05122 | Canola | plastid | 64.84 | 56.51 |
| Bra000724.1-P | Field mustard | plastid | 64.84 | 56.41 |
| AT4G10840.1 | Thale cress | plastid | 64.84 | 56.32 |
| VIT_00s1429g00010.t01 | Wine grape | cytosol | 13.23 | 46.98 |
| HORVU6Hr1G069310.1 | Barley | cytosol | 57.09 | 42.66 |
| HORVU6Hr1G091620.4 | Barley | mitochondrion | 23.06 | 21.22 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:21.1.1.4.3 | UniProt:A0A287T742 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 |
| GO:GO:0005874 | GO:GO:0005886 | GO:GO:0016020 | EnsemblPlantsGene:HORVU6Hr1G004990 | EnsemblPlants:HORVU6Hr1G004990.1 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13374 | PFAM:PF13424 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR19959 | PANTHER:PTHR19959:SF200 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_repeat | UniParc:UPI000B474637 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:10691525..10695891
Molecular Weight (calculated)
57370.1 Da
IEP (calculated)
4.900
GRAVY (calculated)
-0.247
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSGEGGGAA RALEFAERAA RALERRGEGA ELELAMSLHV AAAIHCGLGR HADAVPVLER AVAVVTPPPA PAEGEEAPQP EEEEAVDDRK GEEWALAAFS
101: GWMQLGDTHA MLGRMDESIA CYGKGFEIQM AALGDRDPRV AETCRYLAEA HVQALQFDEA EKLCRKALEI HREHSAPASL EEASDRRLMA LILDAKGDYD
201: GALEHLVLAS MTMVANGRDV EVATIDVAIG NTYLALARFD ESVFSYQKAL TVLKSARGDD HPSVASVFVR LADLYHRTGK LRESKSYCEN ALRVYAKPAP
301: GAAPDEVAGG LMEIAAIYEA LGDLDEALKL LQRALKLLED SPGQWSTVAG IEAQMGVLYY MIGRYADSRN SFESAVSKLR ASGERKSAFF GVLLNQMGLA
401: CVQLFKIDEA AQLFEEARAV LEQECGASHP DTLGVYSNLA AIYDAMGRVE DAIEILEHVL KVREEKLGTA NPDVEDEKKR LAELLKEAGR SRNRKQKSLE
501: NLFGSGGAAR GAKKDGSGGR RWTNFGFRS
101: GWMQLGDTHA MLGRMDESIA CYGKGFEIQM AALGDRDPRV AETCRYLAEA HVQALQFDEA EKLCRKALEI HREHSAPASL EEASDRRLMA LILDAKGDYD
201: GALEHLVLAS MTMVANGRDV EVATIDVAIG NTYLALARFD ESVFSYQKAL TVLKSARGDD HPSVASVFVR LADLYHRTGK LRESKSYCEN ALRVYAKPAP
301: GAAPDEVAGG LMEIAAIYEA LGDLDEALKL LQRALKLLED SPGQWSTVAG IEAQMGVLYY MIGRYADSRN SFESAVSKLR ASGERKSAFF GVLLNQMGLA
401: CVQLFKIDEA AQLFEEARAV LEQECGASHP DTLGVYSNLA AIYDAMGRVE DAIEILEHVL KVREEKLGTA NPDVEDEKKR LAELLKEAGR SRNRKQKSLE
501: NLFGSGGAAR GAKKDGSGGR RWTNFGFRS
001: MPAMPGLVSV KTPSDTPPLR VAVPDTQPLS NPPRTPMKKT PSSTPSRSKP SPNRSTGKKD SPTVSSSTAA VIDVDDPSLD NPDLGPFLLK LARDAIASGE
101: GPNKALDYAI RATKSFERCC AAVAPPIPGG SDGGPVLDLA MSLHVLAAIY CSLGRFDEAV PPLERAIQVP DPTRGPDHSL AAFSGHMQLG DTLSMLGQID
201: RSIACYEEGL KIQIQTLGDT DPRVGETCRY LAEAYVQAMQ FNKAEELCKK TLEIHRAHSE PASLEEAADR RLMAIICEAK GDYENALEHL VLASMAMIAS
301: GQESEVASID VSIGNIYMSL CRFDEAVFSY QKALTVFKAS KGETHPTVAS VFVRLAELYH RTGKLRESKS YCENALRIYN KPVPGTTVEE IAGGLTEISA
401: IYESVDEPEE ALKLLQKSMK LLEDKPGQQS AIAGLEARMG VMYYTVGRYE DARNAFESAV TKLRAAGEKS AFFGVVLNQM GLACVQLFKI DEAGELFEEA
501: RGILEQERGP CDQDTLGVYS NLAATYDAMG RIEDAIEILE QVLKLREEKL GTANPDFEDE KKRLAELLKE AGRSRNYKAK SLQNLIDPNA RPPKKESSAK
601: KWPSLGFKF
101: GPNKALDYAI RATKSFERCC AAVAPPIPGG SDGGPVLDLA MSLHVLAAIY CSLGRFDEAV PPLERAIQVP DPTRGPDHSL AAFSGHMQLG DTLSMLGQID
201: RSIACYEEGL KIQIQTLGDT DPRVGETCRY LAEAYVQAMQ FNKAEELCKK TLEIHRAHSE PASLEEAADR RLMAIICEAK GDYENALEHL VLASMAMIAS
301: GQESEVASID VSIGNIYMSL CRFDEAVFSY QKALTVFKAS KGETHPTVAS VFVRLAELYH RTGKLRESKS YCENALRIYN KPVPGTTVEE IAGGLTEISA
401: IYESVDEPEE ALKLLQKSMK LLEDKPGQQS AIAGLEARMG VMYYTVGRYE DARNAFESAV TKLRAAGEKS AFFGVVLNQM GLACVQLFKI DEAGELFEEA
501: RGILEQERGP CDQDTLGVYS NLAATYDAMG RIEDAIEILE QVLKLREEKL GTANPDFEDE KKRLAELLKE AGRSRNYKAK SLQNLIDPNA RPPKKESSAK
601: KWPSLGFKF
Arabidopsis Description
KLCR1Protein KINESIN LIGHT CHAIN-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:O81629]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.