Factsheet for VIT_00s1429g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g00220.t01	Wine grape	cytosol, plastid	91.95	22.99
KRH06445	Soybean	cytosol	68.46	18.41
VIT_02s0025g02090.t01	Wine grape	plastid	72.48	18.27
GSMUA_Achr10P...	Banana	cytosol	59.06	15.07
Os02t0109800-01	Rice	plasma membrane	57.72	14.36
Zm00001d054069_P001	Maize	plasma membrane	56.38	14.14
TraesCS6B01G037200.1	Wheat	plastid	56.38	13.79
EES06120	Sorghum	plastid	56.38	13.73
Zm00001d014961_P001	Maize	extracellular, mitochondrion, plasma membrane	56.38	13.73
HORVU6Hr1G004990.1	Barley	cytosol	46.98	13.23
TraesCS6A01G026600.1	Wheat	plastid	56.38	12.28
VIT_14s0066g01280.t01	Wine grape	cytosol	54.36	12.09
VIT_17s0000g08260.t01	Wine grape	cytosol	54.36	10.98
TraesCS6D01G030400.1	Wheat	cytosol	36.24	10.93
VIT_07s0005g03110.t01	Wine grape	mitochondrion	24.83	5.72

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	ProteinID:CCB50195	ProteinID:CCB50195.1	UniProt:F6HDA0	EMBL:FN595581
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
PFAM:PF13181	PFAM:PF13374	PFscan:PS50293	PANTHER:PTHR19959	PANTHER:PTHR19959:SF202	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000210AA0C	ArrayExpress:VIT_00s1429g00010	EnsemblPlantsGene:VIT_00s1429g00010
EnsemblPlants:VIT_00s1429g00010.t01	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:39128077..39128526

Molecular Weight (calculated)

16036.1 Da

IEP (calculated)

4.672

GRAVY (calculated)

-0.089

Length

149 amino acids

Sequence
(BLAST)

001: SSLDNPDLGP FLLKMARDTI ASGGSPSKAL DFAIRAARSF ERCSGSEPSL DLAMCLHVVA AFHCSLGRFE EAVPVLERAI RVPDLEKGSD HALAMFSGYM
101: QLGDTHSMLG QLDRSVSAYE SGLKIQTETL GESDPRVAET CRCALLESE

Best Arabidopsis Sequence Match ( AT4G10840.1 )
(BLAST)

001: MPAMPGLVSV KTPSDTPPLR VAVPDTQPLS NPPRTPMKKT PSSTPSRSKP SPNRSTGKKD SPTVSSSTAA VIDVDDPSLD NPDLGPFLLK LARDAIASGE
101: GPNKALDYAI RATKSFERCC AAVAPPIPGG SDGGPVLDLA MSLHVLAAIY CSLGRFDEAV PPLERAIQVP DPTRGPDHSL AAFSGHMQLG DTLSMLGQID
201: RSIACYEEGL KIQIQTLGDT DPRVGETCRY LAEAYVQAMQ FNKAEELCKK TLEIHRAHSE PASLEEAADR RLMAIICEAK GDYENALEHL VLASMAMIAS
301: GQESEVASID VSIGNIYMSL CRFDEAVFSY QKALTVFKAS KGETHPTVAS VFVRLAELYH RTGKLRESKS YCENALRIYN KPVPGTTVEE IAGGLTEISA
401: IYESVDEPEE ALKLLQKSMK LLEDKPGQQS AIAGLEARMG VMYYTVGRYE DARNAFESAV TKLRAAGEKS AFFGVVLNQM GLACVQLFKI DEAGELFEEA
501: RGILEQERGP CDQDTLGVYS NLAATYDAMG RIEDAIEILE QVLKLREEKL GTANPDFEDE KKRLAELLKE AGRSRNYKAK SLQNLIDPNA RPPKKESSAK
601: KWPSLGFKF

Arabidopsis Description

KLCR1Protein KINESIN LIGHT CHAIN-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:O81629]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.