Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017489_P001 | Maize | cytosol | 96.15 | 96.15 |
| Zm00001d052216_P001 | Maize | plastid | 96.15 | 62.11 |
| CDY14553 | Canola | cytosol | 68.27 | 61.74 |
| EES07227 | Sorghum | plastid | 91.35 | 59.01 |
| Bra031870.1-P | Field mustard | mitochondrion | 46.15 | 57.83 |
| Zm00001d018096_P001 | Maize | plastid | 87.5 | 56.52 |
| Os02t0754300-01 | Rice | plastid | 86.54 | 54.55 |
| TraesCS6A01G319100.1 | Wheat | plastid | 79.81 | 50.92 |
| HORVU6Hr1G078290.1 | Barley | plastid | 78.85 | 50.62 |
| TraesCS6D01G298300.1 | Wheat | plastid | 79.81 | 50.61 |
| TraesCS6B01G349300.1 | Wheat | plastid | 78.85 | 50.31 |
| KRH59328 | Soybean | endoplasmic reticulum, plastid | 74.04 | 47.83 |
| VIT_12s0121g00010.t01 | Wine grape | plastid | 72.12 | 46.58 |
| KRH43174 | Soybean | nucleus, plastid | 72.12 | 46.58 |
| VIT_07s0141g00200.t01 | Wine grape | plastid | 72.12 | 46.58 |
| Solyc06g072470.2.1 | Tomato | plastid | 73.08 | 46.34 |
| PGSC0003DMT400069271 | Potato | plastid | 73.08 | 45.24 |
| Solyc03g097950.2.1 | Tomato | nucleus, plastid | 72.12 | 44.64 |
| PGSC0003DMT400083984 | Potato | plastid | 71.15 | 44.31 |
| Bra024367.1-P | Field mustard | plastid | 69.23 | 42.6 |
| CDY08809 | Canola | plastid | 69.23 | 42.6 |
| AT5G65220.1 | Thale cress | plastid | 69.23 | 41.62 |
| CDY37812 | Canola | plastid | 66.35 | 40.83 |
| GSMUA_Achr7P12650_001 | Banana | plastid | 65.38 | 39.77 |
| GSMUA_Achr10P... | Banana | nucleus | 75.0 | 34.21 |
| CDY33973 | Canola | endoplasmic reticulum | 50.96 | 32.72 |
Protein Annotations
| Gene3D:1.10.287.310 | MapMan:17.7.2.1.25 | UniProt:A0A1D6FDV3 | ProteinID:AQK90152.1 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| HAMAP:MF_00374 | PFAM:PF00831 | PANTHER:PTHR10916 | InterPro:Ribosomal_L29/L35 | InterPro:Ribosomal_L29/L35_sf | SUPFAM:SSF46561 |
| TIGRFAMs:TIGR00012 | UniParc:UPI000843E2F3 | EnsemblPlantsGene:Zm00001d008544 | EnsemblPlants:Zm00001d008544_P001 | EnsemblPlants:Zm00001d008544_T001 | : |
Description
50S ribosomal protein L29 chloroplastic
Coordinates
chr8:-:12500160..12501392
Molecular Weight (calculated)
12492.3 Da
IEP (calculated)
10.833
GRAVY (calculated)
-0.997
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAMAKREQD LEEIRAMTTE QMEEEVVDLK GELFLLRLKR SARQEFKNNE FSRMHKRIAP MLTVKREREI EQGINKRLSR KLDRKWKQSI VVRPPPSLRG
101: NKEE
101: NKEE
001: MLSLSIATPG TAAIFRRGTA SATSTSSSFH GVRIQHQVSA RVPAAATISS SSPKPSVVMM SKREAELKEI RSKTTEQLQE EVVDLKGELF MLRLQKSARN
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA
Arabidopsis Description
RPL29AT5G65220 protein [Source:UniProtKB/TrEMBL;Acc:B9DH43]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.