Factsheet for Bra024367.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14553	Canola	cytosol	66.86	98.26
Bra031870.1-P	Field mustard	mitochondrion	47.93	97.59
CDY08809	Canola	plastid	95.86	95.86
AT5G65220.1	Thale cress	plastid	85.8	83.81
Zm00001d017489_P001	Maize	cytosol	43.2	70.19
Zm00001d008544_P001	Maize	cytosol	42.6	69.23
VIT_12s0121g00010.t01	Wine grape	plastid	64.5	67.7
VIT_07s0141g00200.t01	Wine grape	plastid	64.5	67.7
Solyc06g072470.2.1	Tomato	plastid	63.91	65.85
PGSC0003DMT400069271	Potato	plastid	64.5	64.88
KRH59328	Soybean	endoplasmic reticulum, plastid	60.35	63.35
Solyc03g097950.2.1	Tomato	nucleus, plastid	62.13	62.5
PGSC0003DMT400083984	Potato	plastid	60.95	61.68
KRH43174	Soybean	nucleus, plastid	58.58	61.49
EES07227	Sorghum	plastid	50.3	52.8
Zm00001d052216_P001	Maize	plastid	50.3	52.8
TraesCS6A01G319100.1	Wheat	plastid	49.7	51.53
Zm00001d018096_P001	Maize	plastid	48.52	50.93
TraesCS6B01G349300.1	Wheat	plastid	49.11	50.92
GSMUA_Achr7P12650_001	Banana	plastid	51.48	50.88
HORVU6Hr1G078290.1	Barley	plastid	48.52	50.62
TraesCS6D01G298300.1	Wheat	plastid	49.11	50.61
Os02t0754300-01	Rice	plastid	49.11	50.3
GSMUA_Achr10P...	Banana	nucleus	61.54	45.61

Protein Annotations

Gene3D:1.10.287.310	MapMan:17.7.2.1.25	EnsemblPlantsGene:Bra024367	EnsemblPlants:Bra024367.1	EnsemblPlants:Bra024367.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	UniProt:M4E6G3	HAMAP:MF_00374	PFAM:PF00831	PANTHER:PTHR10916
InterPro:Ribosomal_L29/L35	InterPro:Ribosomal_L29/L35_sf	SUPFAM:SSF46561	TIGRFAMs:TIGR00012	UniParc:UPI000253F4FC	SEG:seg

Description

AT5G65220 (E=5e-060) | ribosomal protein L29 family protein

Coordinates

chrA06:+:15255100..15255942

Molecular Weight (calculated)

19135.2 Da

IEP (calculated)

11.027

GRAVY (calculated)

-0.617

Length

169 amino acids

Sequence
(BLAST)

001: MLSLSITSPG TAVTFLRGNV SANSTSSSFH GVRIQHQVSA RVPISSSSRK PLTVMMSKRE AELKEIRAKT TEELNEEVID LKGELFMLRL QKSARNEFKS
101: SEFRRMKKQV ARILTVRRER EIEEGIGKRL SRKLDRQWKK SIVVRPPPSL QKLQEEEAAE EAAEAAKSA

Best Arabidopsis Sequence Match ( AT5G65220.1 )
(BLAST)

001: MLSLSIATPG TAAIFRRGTA SATSTSSSFH GVRIQHQVSA RVPAAATISS SSPKPSVVMM SKREAELKEI RSKTTEQLQE EVVDLKGELF MLRLQKSARN
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA

Arabidopsis Description

RPL29AT5G65220 protein [Source:UniProtKB/TrEMBL;Acc:B9DH43]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.