Factsheet for GSMUA_Achr7P12650_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031870.1-P	Field mustard	mitochondrion	36.26	74.7
CDY14553	Canola	cytosol	45.03	66.96
Zm00001d017489_P001	Maize	cytosol	40.35	66.35
Zm00001d008544_P001	Maize	cytosol	39.77	65.38
VIT_12s0121g00010.t01	Wine grape	plastid	54.97	58.39
VIT_07s0141g00200.t01	Wine grape	plastid	54.97	58.39
KRH59328	Soybean	endoplasmic reticulum, plastid	53.22	56.52
KRH43174	Soybean	nucleus, plastid	52.05	55.28
CDY08809	Canola	plastid	51.46	52.07
Bra024367.1-P	Field mustard	plastid	50.88	51.48
Zm00001d052216_P001	Maize	plastid	47.37	50.31
Os02t0754300-01	Rice	plastid	48.54	50.3
CDY37812	Canola	plastid	49.71	50.3
EES07227	Sorghum	plastid	46.78	49.69
PGSC0003DMT400069271	Potato	plastid	47.95	48.81
Solyc03g097950.2.1	Tomato	nucleus, plastid	47.95	48.81
Solyc06g072470.2.1	Tomato	plastid	46.78	48.78
TraesCS6A01G319100.1	Wheat	plastid	46.2	48.47
PGSC0003DMT400083984	Potato	plastid	46.78	47.9
TraesCS6B01G349300.1	Wheat	plastid	45.61	47.85
HORVU6Hr1G078290.1	Barley	plastid	45.03	47.53
TraesCS6D01G298300.1	Wheat	plastid	45.03	46.95
GSMUA_Achr10P...	Banana	nucleus	62.57	46.93
AT5G65220.1	Thale cress	plastid	47.37	46.82
Zm00001d018096_P001	Maize	plastid	42.69	45.34
CDY33973	Canola	endoplasmic reticulum	38.01	40.12

Protein Annotations

Gene3D:1.10.287.310	MapMan:17.7.2.1.25	ncoils:Coil	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr7G12650_001
EnsemblPlants:GSMUA_Achr7P12650_001	EnsemblPlants:GSMUA_Achr7T12650_001	UniProt:M0TH03	PFAM:PF00831	PANTHER:PTHR10916	InterPro:Ribosomal_L29/L35
InterPro:Ribosomal_L29/L35_sf	SUPFAM:SSF46561	TIGRFAMs:TIGR00012	UniParc:UPI000296384B	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G12650_001]

Coordinates

chr7:+:10172152..10173132

Molecular Weight (calculated)

19011.2 Da

IEP (calculated)

11.570

GRAVY (calculated)

-0.624

Length

171 amino acids

Sequence
(BLAST)

001: MDSFALMGSE PEGRGRKMLA LGVSSPPPSC SSHHVLASFT YLRISPSLSS SRASSFRGIR IGAGVPVSSR GGAGGGRMIN EEVIDLKGEL LMLRLQKSAR
101: NEFKSSEFGR MRKRIARMLT VKREREIEEG INKRLSRKLD RKWKKSIVVR PPPSLRKKQE EQKAAEAEKS S

Best Arabidopsis Sequence Match ( AT5G65220.1 )
(BLAST)

001: MLSLSIATPG TAAIFRRGTA SATSTSSSFH GVRIQHQVSA RVPAAATISS SSPKPSVVMM SKREAELKEI RSKTTEQLQE EVVDLKGELF MLRLQKSARN
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA

Arabidopsis Description

RPL29AT5G65220 protein [Source:UniProtKB/TrEMBL;Acc:B9DH43]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.