Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031870.1-P | Field mustard | mitochondrion | 46.3 | 90.36 |
| CDY14553 | Canola | cytosol | 50.0 | 70.43 |
| Zm00001d017489_P001 | Maize | cytosol | 33.33 | 51.92 |
| Zm00001d008544_P001 | Maize | cytosol | 32.72 | 50.96 |
| CDY08809 | Canola | plastid | 53.09 | 50.89 |
| KRH59328 | Soybean | endoplasmic reticulum, plastid | 46.91 | 47.2 |
| CDY37812 | Canola | plastid | 48.77 | 46.75 |
| AT5G65220.1 | Thale cress | plastid | 49.38 | 46.24 |
| KRH43174 | Soybean | nucleus, plastid | 45.06 | 45.34 |
| VIT_12s0121g00010.t01 | Wine grape | plastid | 41.98 | 42.24 |
| VIT_07s0141g00200.t01 | Wine grape | plastid | 41.98 | 42.24 |
| Solyc06g072470.2.1 | Tomato | plastid | 40.74 | 40.24 |
| PGSC0003DMT400069271 | Potato | plastid | 40.74 | 39.29 |
| Solyc03g097950.2.1 | Tomato | nucleus, plastid | 40.74 | 39.29 |
| PGSC0003DMT400083984 | Potato | plastid | 40.12 | 38.92 |
| Os02t0754300-01 | Rice | plastid | 38.89 | 38.18 |
| GSMUA_Achr7P12650_001 | Banana | plastid | 40.12 | 38.01 |
| TraesCS6A01G319100.1 | Wheat | plastid | 37.65 | 37.42 |
| Zm00001d052216_P001 | Maize | plastid | 36.42 | 36.65 |
| TraesCS6D01G298300.1 | Wheat | plastid | 37.04 | 36.59 |
| HORVU6Hr1G078290.1 | Barley | plastid | 36.42 | 36.42 |
| TraesCS6B01G349300.1 | Wheat | plastid | 36.42 | 36.2 |
| EES07227 | Sorghum | plastid | 35.19 | 35.4 |
| Zm00001d018096_P001 | Maize | plastid | 32.72 | 32.92 |
| GSMUA_Achr10P... | Banana | nucleus | 38.27 | 27.19 |
Protein Annotations
| EnsemblPlants:CDY33973 | EnsemblPlantsGene:GSBRNA2T00055812001 | GO:A0A078HAV2 | PANTHER:PTHR10916 | ProteinID:CDY33973 | ProteinID:CDY33973.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE5C9C | UniProt:A0A078HAV2 | MapMan:17.7.2.1.25 | : |
Description
BnaC02g43640DBnaC02g43640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAV2]
Coordinates
chrLK032325:-:205819..208603
Molecular Weight (calculated)
19215.5 Da
IEP (calculated)
11.877
GRAVY (calculated)
-0.703
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRTVTFFSE FIFEVIFFFF FFRQCSASLS PHQGQRRLSS EELSRRLQPR LRSMASESST RSPLACRRRF HRRLVKKMVV MMSKREARNE FKSSEFRRMK
101: KQVARILTVR REREIEEGIG KRLSRKLDRQ WKKSIVVRPP PSLKKLQEEE AAEEAAEAAK SA
101: KQVARILTVR REREIEEGIG KRLSRKLDRQ WKKSIVVRPP PSLKKLQEEE AAEEAAEAAK SA
001: MLSLSIATPG TAAIFRRGTA SATSTSSSFH GVRIQHQVSA RVPAAATISS SSPKPSVVMM SKREAELKEI RSKTTEQLQE EVVDLKGELF MLRLQKSARN
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA
Arabidopsis Description
RPL29AT5G65220 protein [Source:UniProtKB/TrEMBL;Acc:B9DH43]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.