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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 2
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14553 Canola cytosol 39.04 77.39
Zm00001d017489_P001 Maize cytosol 35.09 76.92
Zm00001d008544_P001 Maize cytosol 34.21 75.0
Bra031870.1-P Field mustard mitochondrion 27.19 74.7
VIT_12s0121g00010.t01 Wine grape plastid 48.68 68.94
VIT_07s0141g00200.t01 Wine grape plastid 48.68 68.94
KRH59328 Soybean endoplasmic reticulum, plastid 46.49 65.84
KRH43174 Soybean nucleus, plastid 46.05 65.22
CDY37812 Canola plastid 46.49 62.72
GSMUA_Achr7P12650_001 Banana plastid 46.93 62.57
Solyc06g072470.2.1 Tomato plastid 44.3 61.59
Bra024367.1-P Field mustard plastid 45.61 61.54
Solyc03g097950.2.1 Tomato nucleus, plastid 45.18 61.31
PGSC0003DMT400083984 Potato plastid 44.74 61.08
CDY08809 Canola plastid 45.18 60.95
PGSC0003DMT400069271 Potato plastid 44.74 60.71
Os02t0754300-01 Rice plastid 41.23 56.97
Zm00001d052216_P001 Maize plastid 39.91 56.52
AT5G65220.1 Thale cress plastid 42.54 56.07
EES07227 Sorghum plastid 39.04 55.28
Zm00001d018096_P001 Maize plastid 38.6 54.66
TraesCS6A01G319100.1 Wheat plastid 38.16 53.37
TraesCS6B01G349300.1 Wheat plastid 38.16 53.37
HORVU6Hr1G078290.1 Barley plastid 37.28 52.47
TraesCS6D01G298300.1 Wheat plastid 37.72 52.44
CDY33973 Canola endoplasmic reticulum 27.19 38.27
Protein Annotations
Gene3D:1.10.287.310MapMan:17.7.2.1.25ncoils:CoilGO:GO:0003674GO:GO:0003735GO:GO:0005198
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538EnsemblPlantsGene:GSMUA_Achr10G24550_001
EnsemblPlants:GSMUA_Achr10P24550_001EnsemblPlants:GSMUA_Achr10T24550_001UniProt:M0RL30HAMAP:MF_00374PFAM:PF00831InterPro:Ribosomal_L29/L35
InterPro:Ribosomal_L29/L35_sfSUPFAM:SSF46561TIGRFAMs:TIGR00012UniParc:UPI000296905FSEG:seg:
Description
50S ribosomal protein L29, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G24550_001]
Coordinates
chr10:+:28965616..28966875
Molecular Weight (calculated)
26258.9 Da
IEP (calculated)
11.193
GRAVY (calculated)
-0.879
Length
228 amino acids
Sequence
(BLAST)
001: MDFLKKRALF SHIKNKKLKN IREEKHDERY LIGNASSSER VERERASERS RKMIALGVSS PSSCSSAHHV LASLGISPQL HSWRASSFRG IRLEAGVRTA
101: TPLSYRSGAS GGRMVVNMAK REEEMKEIRA KTTEEINEEV IDLKGELLML RLQKSARNEF KSSEFGRMRK RIARMLTVKR EREIEEGINK RLSRKLDRKW
201: KKSIVVRPPP SLRKKQEEQK AAEAEKSS
Best Arabidopsis Sequence Match ( AT5G65220.1 )
(BLAST)
001: MLSLSIATPG TAAIFRRGTA SATSTSSSFH GVRIQHQVSA RVPAAATISS SSPKPSVVMM SKREAELKEI RSKTTEQLQE EVVDLKGELF MLRLQKSARN
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA
Arabidopsis Description
RPL29AT5G65220 protein [Source:UniProtKB/TrEMBL;Acc:B9DH43]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.