Factsheet for Os02t0754300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
plastid: 21433289
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017489_P001	Maize	cytosol	55.76	88.46
Zm00001d008544_P001	Maize	cytosol	54.55	86.54
EES07227	Sorghum	plastid	79.39	81.37
TraesCS6A01G319100.1	Wheat	plastid	80.0	80.98
TraesCS6B01G349300.1	Wheat	plastid	79.39	80.37
HORVU6Hr1G078290.1	Barley	plastid	78.79	80.25
Zm00001d052216_P001	Maize	plastid	78.18	80.12
TraesCS6D01G298300.1	Wheat	plastid	78.18	78.66
Zm00001d018096_P001	Maize	plastid	73.33	75.16
CDY14553	Canola	cytosol	45.45	65.22
Bra031870.1-P	Field mustard	mitochondrion	31.52	62.65
KRH59328	Soybean	endoplasmic reticulum, plastid	55.15	56.52
KRH43174	Soybean	nucleus, plastid	54.55	55.9
VIT_12s0121g00010.t01	Wine grape	plastid	53.33	54.66
VIT_07s0141g00200.t01	Wine grape	plastid	53.33	54.66
Solyc06g072470.2.1	Tomato	plastid	53.33	53.66
PGSC0003DMT400069271	Potato	plastid	53.94	52.98
Solyc03g097950.2.1	Tomato	nucleus, plastid	52.73	51.79
PGSC0003DMT400083984	Potato	plastid	51.52	50.9
CDY08809	Canola	plastid	51.52	50.3
Bra024367.1-P	Field mustard	plastid	50.3	49.11
AT5G65220.1	Thale cress	plastid	50.91	48.55
GSMUA_Achr7P12650_001	Banana	plastid	50.3	48.54
CDY37812	Canola	plastid	49.7	48.52
GSMUA_Achr10P...	Banana	nucleus	56.97	41.23
CDY33973	Canola	endoplasmic reticulum	38.18	38.89

Protein Annotations

Gene3D:1.10.287.310	MapMan:17.7.2.1.25	EntrezGene:4330763	EMBL:AK068621	EMBL:AK099805	ProteinID:BAD17237.1
ProteinID:BAF10067.1	ProteinID:BAS80975.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	HAMAP:MF_00374	EnsemblPlantsGene:Os02g0754300
EnsemblPlants:Os02t0754300-01	PFAM:PF00831	PANTHER:PTHR10916	UniProt:Q6Z6A0	InterPro:Ribosomal_L29/L35	InterPro:Ribosomal_L29/L35_sf
SUPFAM:SSF46561	TIGRFAMs:TIGR00012	UniParc:UPI000035AE56	RefSeq:XP_015623221.1	SEG:seg	:

Description

Ribosomal protein L29 family protein. (Os02t0754300-01)

Coordinates

chr2:+:31719725..31721468

Molecular Weight (calculated)

18333.6 Da

IEP (calculated)

11.511

GRAVY (calculated)

-0.475

Length

165 amino acids

Sequence
(BLAST)

001: MATMSLAAAS PLASTPRGLA VSTPRTAFLG LLTGGASLAP FPGLAAAAAP PRLPAGRGDA AVARMAKREQ ELEEIRAMPT EKIEEEVVDL KGELFMLRLK
101: RSARQEFKSS EFGRMRKRIA RMLTVKRERE IEQGINKRLS RKLDRKWKQS IVVRPPPSLR ENKEE

Best Arabidopsis Sequence Match ( AT5G65220.1 )
(BLAST)

001: MLSLSIATPG TAAIFRRGTA SATSTSSSFH GVRIQHQVSA RVPAAATISS SSPKPSVVMM SKREAELKEI RSKTTEQLQE EVVDLKGELF MLRLQKSARN
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA

Arabidopsis Description

RPL29AT5G65220 protein [Source:UniProtKB/TrEMBL;Acc:B9DH43]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.