Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g072470.2.1 | Tomato | plastid | 94.05 | 96.34 |
| PGSC0003DMT400083984 | Potato | plastid | 81.55 | 82.04 |
| CDY14553 | Canola | cytosol | 53.57 | 78.26 |
| Bra031870.1-P | Field mustard | mitochondrion | 38.1 | 77.11 |
| Zm00001d017489_P001 | Maize | cytosol | 46.43 | 75.0 |
| Zm00001d008544_P001 | Maize | cytosol | 45.24 | 73.08 |
| VIT_12s0121g00010.t01 | Wine grape | plastid | 69.64 | 72.67 |
| VIT_07s0141g00200.t01 | Wine grape | plastid | 69.64 | 72.67 |
| CDY08809 | Canola | plastid | 66.67 | 66.27 |
| AT5G65220.1 | Thale cress | plastid | 67.26 | 65.32 |
| KRH59328 | Soybean | endoplasmic reticulum, plastid | 62.5 | 65.22 |
| KRH43174 | Soybean | nucleus, plastid | 61.9 | 64.6 |
| Bra024367.1-P | Field mustard | plastid | 64.88 | 64.5 |
| CDY37812 | Canola | plastid | 64.29 | 63.91 |
| Zm00001d052216_P001 | Maize | plastid | 52.98 | 55.28 |
| EES07227 | Sorghum | plastid | 52.38 | 54.66 |
| Os02t0754300-01 | Rice | plastid | 52.98 | 53.94 |
| Zm00001d018096_P001 | Maize | plastid | 50.0 | 52.17 |
| TraesCS6A01G319100.1 | Wheat | plastid | 50.6 | 52.15 |
| TraesCS6B01G349300.1 | Wheat | plastid | 50.6 | 52.15 |
| TraesCS6D01G298300.1 | Wheat | plastid | 50.6 | 51.83 |
| HORVU6Hr1G078290.1 | Barley | plastid | 49.4 | 51.23 |
| GSMUA_Achr7P12650_001 | Banana | plastid | 48.81 | 47.95 |
| GSMUA_Achr10P... | Banana | nucleus | 60.71 | 44.74 |
| CDY33973 | Canola | endoplasmic reticulum | 39.29 | 40.74 |
Protein Annotations
| Gene3D:1.10.287.310 | EntrezGene:102591222 | MapMan:17.7.2.1.25 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| UniProt:M1CK76 | HAMAP:MF_00374 | PFAM:PF00831 | EnsemblPlantsGene:PGSC0003DMG400026946 | PGSC:PGSC0003DMG400026946 | EnsemblPlants:PGSC0003DMT400069271 |
| PANTHER:PTHR10916 | InterPro:Ribosomal_L29/L35 | InterPro:Ribosomal_L29/L35_sf | SUPFAM:SSF46561 | TIGRFAMs:TIGR00012 | UniParc:UPI00029554A2 |
| RefSeq:XP_006347357.1 | SEG:seg | : | : | : | : |
Description
50S ribosomal protein L29, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400026946]
Coordinates
chr6:-:53248933..53250663
Molecular Weight (calculated)
19256.6 Da
IEP (calculated)
10.983
GRAVY (calculated)
-0.695
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSLSIASPS PSPSGVTFTS KINLSKSSFH GIRIPKIIQA RAVNAPPPSC PSLVVKMAKR EEELKEIRTK TTEELQEEIV DLKGELFMLR LQRSARNEFK
101: SSEFLRMRKR IARMLTVKRE REVEEGINKR ISRKLDRKWK KSIVPRPPPS LKKLREEEAA EEAKESAS
101: SSEFLRMRKR IARMLTVKRE REVEEGINKR ISRKLDRKWK KSIVPRPPPS LKKLREEEAA EEAKESAS
001: MLSLSIATPG TAAIFRRGTA SATSTSSSFH GVRIQHQVSA RVPAAATISS SSPKPSVVMM SKREAELKEI RSKTTEQLQE EVVDLKGELF MLRLQKSARN
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA
101: EFKSSDFRRM KKQVARMLTV KREREIKEGI KKRLSRKLDR QWKKSIVPRP PPSLKKLQEE EAAEEAAEAA KSA
Arabidopsis Description
RPL29AT5G65220 protein [Source:UniProtKB/TrEMBL;Acc:B9DH43]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.