Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11990 | Sorghum | nucleus | 89.42 | 92.25 |
| Zm00001d003996_P001 | Maize | nucleus | 85.84 | 88.4 |
| Os04t0382800-00 | Rice | nucleus | 67.24 | 69.0 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 61.6 | 64.81 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 61.26 | 63.43 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 61.26 | 63.43 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 54.95 | 63.26 |
| Zm00001d000402_P001 | Maize | mitochondrion | 36.18 | 38.69 |
| Bra001412.1-P | Field mustard | nucleus | 16.72 | 28.24 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 29.01 | 27.55 |
| AT3G11590.1 | Thale cress | plastid | 28.84 | 27.17 |
| CDY01038 | Canola | plastid | 28.16 | 27.05 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 30.03 | 26.99 |
| Solyc11g068720.1.1 | Tomato | nucleus | 28.84 | 26.66 |
| Bra034827.1-P | Field mustard | plastid | 27.82 | 26.55 |
| CDY08511 | Canola | plastid | 27.82 | 26.5 |
| PGSC0003DMT400067737 | Potato | nucleus | 25.77 | 26.44 |
| Bra006620.1-P | Field mustard | nucleus | 20.14 | 26.16 |
| CDX70996 | Canola | nucleus | 21.16 | 26.11 |
| CDX88802 | Canola | nucleus | 20.65 | 25.85 |
| CDY56601 | Canola | cytosol, golgi, plastid | 16.21 | 25.75 |
| VIT_08s0007g02790.t01 | Wine grape | plastid | 28.84 | 25.68 |
| PGSC0003DMT400072353 | Potato | plastid | 28.5 | 25.5 |
| CDX73866 | Canola | cytosol | 16.04 | 25.47 |
| KRG96225 | Soybean | nucleus | 28.33 | 25.34 |
| AT5G22310.1 | Thale cress | nucleus | 20.65 | 25.16 |
| Bra002404.1-P | Field mustard | nucleus | 20.65 | 25.0 |
| CDX92367 | Canola | mitochondrion, plastid | 20.48 | 25.0 |
| Solyc06g074190.2.1 | Tomato | nucleus | 23.04 | 24.91 |
| CDY67997 | Canola | mitochondrion, plastid | 19.97 | 24.84 |
| KRH67971 | Soybean | plastid | 27.82 | 24.7 |
| Solyc10g083190.1.1 | Tomato | plastid | 27.82 | 24.66 |
| KRH25284 | Soybean | plastid | 27.65 | 24.58 |
| PGSC0003DMT400015076 | Potato | nucleus | 23.38 | 24.08 |
| KRH30384 | Soybean | plastid | 27.13 | 24.02 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 20.99 | 21.47 |
| Zm00001d038595_P001 | Maize | nucleus, plastid | 21.16 | 18.4 |
| Zm00001d018609_P001 | Maize | mitochondrion, plastid | 18.43 | 18.37 |
| Zm00001d012593_P001 | Maize | plastid | 18.6 | 18.2 |
| Zm00001d043218_P001 | Maize | plastid | 20.48 | 17.83 |
| Zm00001d026344_P001 | Maize | plastid | 20.82 | 17.76 |
| Zm00001d002252_P001 | Maize | plastid | 20.31 | 17.35 |
| Zm00001d053356_P002 | Maize | nucleus | 17.75 | 16.4 |
| Zm00001d000005_P002 | Maize | plastid | 19.11 | 16.26 |
| Zm00001d037050_P001 | Maize | nucleus | 17.24 | 15.26 |
Protein Annotations
| EnsemblPlants:Zm00001d025208_P002 | EnsemblPlants:Zm00001d025208_T002 | EnsemblPlantsGene:Zm00001d025208 | EntrezGene:103641579 | ncoils:Coil | PANTHER:PTHR31071 |
| PANTHER:PTHR31071:SF18 | ProteinID:AQK43205.1 | SEG:seg | UniParc:UPI0004DEBD03 | UniProt:A0A1D6J5J3 | MapMan:35.1 |
Description
myosin heavy chain-related
Coordinates
chr10:-:109171895..109178235
Molecular Weight (calculated)
65260.2 Da
IEP (calculated)
6.462
GRAVY (calculated)
-0.841
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRWGDAEEG AAADEAIAAA AAVRLANKIR KRRAVSSSGG SDPAAGRRLR SRRPAVLLPR RRTSAGGDMS ESSRGRHCRG GGTRLADGTW PSASARRLVD
101: AFWQDMDSDL LEGDAAAAAA RRSLVQWSGA STELSQRSRS KSKILEADGK GSRRNGHARW LSADMTSNGH ARWLSADMTS NGSGMEVGKF SQDDVSRCPE
201: KTVNLQDLQN SLIASKELVK VLAHIWGPGE LNPSSVSLIS ALRSELDVAR SHVRKLIKEK KSNPYEIEDL KKQLAEEMES WKVKQKEKVA NALQFIVSEL
301: DTEKKSRKRA EKTNKKLSVA LANTEASLQA VTKELERERK SKGRVEKICN ELIKGIDEDK AEVEALKRET EKAQEELQKE REMLQLADEW REQRVQMKLL
401: EARLQFEEKN AAVNQLRDEL QAYLDTRKEQ EPMNDPMQLS HASENGATAA DDVVPDRNGG NFSEDDASEG SDIHSIELNV DGVNRTYTWS YTPSSKGRQR
501: SASRHESFSD RGMDGVNSWR LEQSFRGMDE ELEGDWAEGC SNGILTMDHD EERYLAIKNL REQMLAGSGF ILSQGRENAE RECCGL
101: AFWQDMDSDL LEGDAAAAAA RRSLVQWSGA STELSQRSRS KSKILEADGK GSRRNGHARW LSADMTSNGH ARWLSADMTS NGSGMEVGKF SQDDVSRCPE
201: KTVNLQDLQN SLIASKELVK VLAHIWGPGE LNPSSVSLIS ALRSELDVAR SHVRKLIKEK KSNPYEIEDL KKQLAEEMES WKVKQKEKVA NALQFIVSEL
301: DTEKKSRKRA EKTNKKLSVA LANTEASLQA VTKELERERK SKGRVEKICN ELIKGIDEDK AEVEALKRET EKAQEELQKE REMLQLADEW REQRVQMKLL
401: EARLQFEEKN AAVNQLRDEL QAYLDTRKEQ EPMNDPMQLS HASENGATAA DDVVPDRNGG NFSEDDASEG SDIHSIELNV DGVNRTYTWS YTPSSKGRQR
501: SASRHESFSD RGMDGVNSWR LEQSFRGMDE ELEGDWAEGC SNGILTMDHD EERYLAIKNL REQMLAGSGF ILSQGRENAE RECCGL
001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
Arabidopsis Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.