Subcellular Localization
min:
: max
Winner_takes_all: plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002404.1-P | Field mustard | nucleus | 96.04 | 95.25 |
| CDY67997 | Canola | mitochondrion, plastid | 92.08 | 93.84 |
| CDX70996 | Canola | nucleus | 77.92 | 78.74 |
| AT5G22310.1 | Thale cress | nucleus | 78.75 | 78.59 |
| CDX88802 | Canola | nucleus | 76.25 | 78.21 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 38.12 | 28.07 |
| CDY01038 | Canola | plastid | 34.79 | 27.38 |
| CDY08511 | Canola | plastid | 34.79 | 27.15 |
| KRH25284 | Soybean | plastid | 35.42 | 25.8 |
| KRH30384 | Soybean | plastid | 34.58 | 25.08 |
| Solyc11g068720.1.1 | Tomato | nucleus | 32.71 | 24.76 |
| Os02t0506100-00 | Rice | plastid | 22.29 | 24.54 |
| PGSC0003DMT400067737 | Potato | nucleus | 28.12 | 23.64 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 27.08 | 22.97 |
| Solyc06g074190.2.1 | Tomato | nucleus | 25.83 | 22.88 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 26.25 | 22.62 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 26.67 | 22.61 |
| TraesCS7B01G035800.1 | Wheat | nucleus | 26.46 | 21.97 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 26.46 | 21.93 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 28.12 | 21.88 |
| PGSC0003DMT400015076 | Potato | nucleus | 25.83 | 21.79 |
| TraesCS7A01G134600.1 | Wheat | nucleus | 26.25 | 21.76 |
| CDX73866 | Canola | cytosol | 16.67 | 21.68 |
| EES11990 | Sorghum | nucleus | 25.62 | 21.65 |
| Zm00001d003996_P001 | Maize | nucleus | 25.42 | 21.44 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 22.71 | 21.41 |
| CDY56601 | Canola | cytosol, golgi, plastid | 16.46 | 21.41 |
| Os04t0382800-00 | Rice | nucleus | 25.0 | 21.02 |
| CDX80001 | Canola | nucleus | 14.38 | 20.78 |
| Zm00001d025208_P002 | Maize | nucleus | 25.0 | 20.48 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 22.71 | 19.02 |
| KXG30263 | Sorghum | mitochondrion | 24.58 | 18.97 |
| Zm00001d000402_P001 | Maize | mitochondrion | 20.83 | 18.25 |
| CDY42023 | Canola | nucleus | 14.79 | 16.99 |
| CDY25566 | Canola | nucleus | 20.0 | 16.58 |
| CDY34403 | Canola | nucleus | 19.38 | 16.17 |
| CDY37111 | Canola | nucleus | 22.71 | 16.05 |
| CDY22812 | Canola | nucleus | 21.67 | 15.76 |
| CDY39728 | Canola | nucleus | 19.38 | 15.6 |
| CDY29821 | Canola | mitochondrion | 20.62 | 15.49 |
| CDY25414 | Canola | mitochondrion | 20.21 | 15.23 |
| CDY44461 | Canola | nucleus | 18.96 | 15.09 |
| CDX80002 | Canola | cytosol | 0.21 | 2.17 |
Protein Annotations
| EnsemblPlants:CDX92367 | EnsemblPlantsGene:GSBRNA2T00154114001 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF16 | ProteinID:CDX92367 |
| ProteinID:CDX92367.1 | SEG:seg | UniParc:UPI0004EED3B5 | MapMan:35.2 | : | : |
Description
BnaA10g14060D
Coordinates
chrLK031872:+:214875..216482
Molecular Weight (calculated)
55379.5 Da
IEP (calculated)
7.906
GRAVY (calculated)
-1.026
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRKRGCMIR KRGCSSSSSS SLARRNRFKR AIFAGKRASL EDGGGSGTPV KSISAAKTPV LLPFSPENPP VCQSQKRCVS ARKLAATLWE ISDGNTEPPV
101: SNEDCLRNKK PPRNRRKTST EIPFPDFPLK SSHPVSHERI LLRDDTVRRR STIPQKLQLI EYKTIGTNSV KTRFKNISEG LTTSKELVKV LKKIGHLGDD
201: HKNASNRLIS ALVYELDRAR SSLKHLMSEF NAEEAEKRRL IEKLQEEAVS ERKLRLRTEK MNMRLARELE EAKETERKMK EEMEREKRAK DVLEEVCDEL
301: ARGIGDDKKE MEKEREMMHI ADVLREERVQ MKLTEARHEF EEKHAAVERL KKELRRVVDG EEEEKGSSEI RRVLEMIDGS DDDDEEEEEE ESDLKSIELN
401: MESGSKWGYV ESRRDGRRES RFVGSGEDDD DHHVEKRSVI VDNGERDESL KTLREYIVSN VRFIGSSSSE QWNHRHLPNV
101: SNEDCLRNKK PPRNRRKTST EIPFPDFPLK SSHPVSHERI LLRDDTVRRR STIPQKLQLI EYKTIGTNSV KTRFKNISEG LTTSKELVKV LKKIGHLGDD
201: HKNASNRLIS ALVYELDRAR SSLKHLMSEF NAEEAEKRRL IEKLQEEAVS ERKLRLRTEK MNMRLARELE EAKETERKMK EEMEREKRAK DVLEEVCDEL
301: ARGIGDDKKE MEKEREMMHI ADVLREERVQ MKLTEARHEF EEKHAAVERL KKELRRVVDG EEEEKGSSEI RRVLEMIDGS DDDDEEEEEE ESDLKSIELN
401: MESGSKWGYV ESRRDGRRES RFVGSGEDDD DHHVEKRSVI VDNGERDESL KTLREYIVSN VRFIGSSSSE QWNHRHLPNV
001: MEQRKKGCKI RKRGGSSSSS SSLARRNRFK RAIFAGKRAA QDDGGSGTPV KSITAAKTPV LLSFSPENLP IDHHQLQKSC VSARKLAATL WEINDDADPP
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
Arabidopsis Description
AT5g22310/MWD9_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.