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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67817
CDX68130
CDX69568
CDX69584
CDX69854
CDX70212
CDX71815
CDX71860
CDX72171
CDX77081
CDX85599
CDX89038
CDX91066
CDX92626
CDX96983
CDX97807
CDX98399
CDY03470
CDY03843
CDY04918
CDY05962
CDY09851
CDY09874
CDY10748
CDY10996
CDY14147
CDY23989
CDY24507
CDY26353
CDY27243
CDY28668
CDY28862
CDY29659
CDY30923
CDY32850
CDY34269
CDY36813
CDY37505
CDY39030
CDY41170
CDY44603
CDY44869
CDY45775
CDY47131
CDY47586
CDY52676
CDY52677
CDY56997
CDY58906
CDY65103
CDY65104
CDY65105
CDY69854
CDY70563

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G22960.1 CDX68130 AT1G19680.1 21798944
AT3G22960.1 CDY39030 AT1G19680.1 21798944
AT3G22960.1 CDY24507 AT1G60010.1 21798944
AT3G22960.1 CDY30923 AT1G60010.1 21798944
AT3G22960.1 CDY69854 AT1G60010.1 21798944
AT3G22960.1 CDY70563 AT1G60010.1 21798944
AT3G22960.1 CDY03843 AT1G61590.1 21798944
AT3G22960.1 CDY26353 AT1G61590.1 21798944
AT3G22960.1 CDY47586 AT1G61590.1 21798944
AT3G22960.1 CDY52676 AT1G61590.1 21798944
AT3G22960.1 CDY52677 AT1G61590.1 21798944
AT3G22960.1 CDY65103 AT1G61590.1 21798944
AT3G22960.1 CDY65104 AT1G61590.1 21798944
AT3G22960.1 CDY65105 AT1G61590.1 21798944
AT3G22960.1 CDX97807 AT2G30580.1 21798944
AT3G22960.1 CDY10748 AT2G30580.1 21798944
AT3G22960.1 CDY23989 AT2G30580.1 21798944
AT3G22960.1 CDY29659 AT2G30580.1 21798944
AT3G22960.1 CDY47131 AT2G30580.1 21798944
AT3G22960.1 CDX77081 AT3G01690.1 21798944
AT3G22960.1 CDY28668 AT3G01690.1 21798944
AT3G22960.1 CDY28862 AT3G01690.1 21798944
AT3G22960.1 CDY32850 AT3G01690.1 21798944
AT3G22960.1 CDY37505 AT3G01690.1 21798944
AT3G22960.1 CDX72171 AT3G56130.1 21798944
AT3G22960.1 CDY27243 AT3G56130.1 21798944
AT3G22960.1 CDX67817 AT3G59920.1 21798944
AT3G22960.1 CDX71860 AT3G59920.1 21798944
AT3G22960.1 CDX89038 AT3G59920.1 21798944
AT3G22960.1 CDX98399 AT3G59920.1 21798944
AT3G22960.1 CDY05962 AT3G59920.1 21798944
AT3G22960.1 CDY45775 AT3G59920.1 21798944
AT3G22960.1 CDX71815 AT3G60360.1 21798944
AT3G22960.1 CDY41170 AT3G60360.1 21798944
AT3G22960.1 CDY56997 AT3G60360.1 21798944
AT3G22960.1 CDY58906 AT3G60360.1 21798944
AT3G22960.1 CDX92626 AT4G24240.1 21798944
AT3G22960.1 CDY03470 AT4G24240.1 21798944
AT3G22960.1 CDY10996 AT4G24240.1 21798944
AT3G22960.1 CDY34269 AT4G24240.1 21798944
AT3G22960.1 CDX70212 AT5G04600.1 21798944
AT3G22960.1 CDY04918 AT5G04600.1 21798944
AT3G22960.1 CDY14147 AT5G04600.1 21798944
AT3G22960.1 CDY44869 AT5G04600.1 21798944
AT3G22960.1 CDX69854 AT5G10210.1 21798944
AT3G22960.1 CDX96983 AT5G10210.1 21798944
AT3G22960.1 CDX69584 AT5G14390.1 21798944
AT3G22960.1 CDX85599 AT5G14390.1 21798944
AT3G22960.1 CDX91066 AT5G14390.1 21798944
AT3G22960.1 CDY09851 AT5G14390.1 21798944
AT3G22960.1 CDX69568 AT5G14660.1 21798944
AT3G22960.1 CDY09874 AT5G14660.1 21798944
AT3G22960.1 CDY36813 AT5G35410.1 21798944
AT3G22960.1 CDY44603 AT5G35410.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92969 Canola plastid 97.93 98.96
Bra001896.1-P Field mustard plastid 95.53 98.23
CDY40829 Canola plastid 89.33 89.95
AT3G22960.1 Thale cress plastid 91.74 89.43
CDY35484 Canola plastid 88.81 89.43
GSMUA_Achr2P17520_001 Banana cytosol 62.13 86.36
GSMUA_Achr7P16760_001 Banana cytosol 23.58 86.16
KRG92440 Soybean cytosol, nucleus 67.13 85.9
GSMUA_Achr4P21110_001 Banana cytosol 60.41 83.97
KRH34357 Soybean nucleus 68.33 83.58
GSMUA_Achr4P28510_001 Banana cytosol 59.72 83.01
VIT_05s0020g04480.t01 Wine grape plastid 77.97 77.3
Solyc09g082970.2.1 Tomato plastid 77.45 75.89
Os07t0181000-01 Rice plastid 72.29 74.87
Zm00001d034443_P001 Maize plastid 73.84 74.74
EER95951 Sorghum plastid 74.18 73.93
KXG37365 Sorghum plastid 73.15 73.53
TraesCS2D01G237900.1 Wheat plastid 72.12 73.51
TraesCS2A01G240200.1 Wheat plastid 71.94 73.33
Zm00001d018961_P002 Maize plastid 74.35 69.79
VIT_00s0179g00350.t01 Wine grape plastid 67.64 69.07
HORVU2Hr1G050140.1 Barley plastid 71.43 68.71
TraesCS2B01G257800.1 Wheat plastid 71.08 66.94
CDY19645 Canola plastid 38.9 38.9
CDY66652 Canola plastid 38.55 38.62
CDY60911 Canola plastid 38.55 38.62
CDY32285 Canola plastid 37.69 38.35
CDY48872 Canola plastid 37.35 38.0
CDY01123 Canola cytosol 2.58 34.09
CDX81195 Canola cytosol 13.08 32.62
CDY60039 Canola cytosol 13.08 32.62
CDY42677 Canola cytosol 6.02 31.82
CDY11933 Canola cytosol, mitochondrion, plastid 23.58 31.57
CDY32790 Canola cytosol 22.72 31.35
CDY46578 Canola cytosol 22.72 31.35
CDX78344 Canola cytosol 26.16 30.83
CDX81114 Canola cytosol 26.16 30.83
CDY41529 Canola cytosol 25.82 30.43
CDX84432 Canola cytosol 25.82 30.43
CDY21551 Canola cytosol 26.68 30.39
CDY27175 Canola cytosol, mitochondrion 23.58 30.31
CDX69938 Canola cytosol 26.51 30.2
CDY39852 Canola cytosol 25.47 30.02
CDX81194 Canola cytosol 11.02 29.77
CDY66490 Canola cytosol 25.13 29.67
CDY45309 Canola plastid 15.83 29.58
CDY66977 Canola cytosol 24.96 29.47
CDY50878 Canola cytosol 24.78 29.39
CDY04408 Canola cytosol 4.65 29.03
CDY47408 Canola cytosol 4.65 29.03
CDY60038 Canola cytosol 11.02 28.96
CDY36795 Canola endoplasmic reticulum 19.62 28.93
CDX74201 Canola cytosol 23.24 28.48
CDX92057 Canola cytosol 22.89 28.06
CDY26450 Canola cytosol 4.48 27.96
CDY42900 Canola cytosol 22.55 27.75
CDY42678 Canola cytosol 4.13 26.97
CDY58286 Canola cytosol, plastid 22.2 24.48
CDX76243 Canola cytosol, plastid 22.03 24.29
CDX78139 Canola cytosol, plastid 21.69 23.91
CDX73585 Canola cytosol, plastid 21.69 23.91
CDY13321 Canola cytosol, plastid 21.51 23.72
CDX72091 Canola mitochondrion, plastid 18.76 23.64
CDX67554 Canola cytosol, plastid 21.34 23.53
CDY00607 Canola cytosol 15.49 23.32
CDY42679 Canola mitochondrion 3.79 19.13
CDY69935 Canola cytosol 14.63 17.63
CDX68515 Canola mitochondrion 15.66 13.13
CDX83068 Canola plastid 8.78 7.02
Protein Annotations
KEGG:00010+2.7.1.40KEGG:00230+2.7.1.40KEGG:00620+2.7.1.40Gene3D:2.40.33.10MapMan:3.12.8Gene3D:3.20.20.60
Gene3D:3.40.1380.20MapMan:5.1.2.1GO:A0A078E631EnsemblPlants:CDX94878ProteinID:CDX94878ProteinID:CDX94878.1
GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0004743GO:GO:0005488GO:GO:0005975
GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030955EnsemblPlantsGene:GSBRNA2T00158427001InterPro:IPR015806
InterPro:IPR036918PFAM:PF00224PFAM:PF02887PRINTS:PR01050ScanProsite:PS00110PANTHER:PTHR11817
PANTHER:PTHR11817:SF14MetaCyc:PWY-1042MetaCyc:PWY-2221MetaCyc:PWY-5484MetaCyc:PWY-5723MetaCyc:PWY-6142
MetaCyc:PWY-6886MetaCyc:PWY-6901MetaCyc:PWY-7003MetaCyc:PWY-7218MetaCyc:PWY-7383InterPro:Pyr_Knase
InterPro:Pyrv/PenolPyrv_Kinase-like_domInterPro:Pyrv_Knase-like_insert_dom_sfInterPro:Pyrv_Knase_ASInterPro:Pyrv_Knase_CInterPro:Pyrv_Knase_C_sfInterPro:Pyrv_Knase_brl
InterPro:Pyrv_Knase_insert_dom_sfSUPFAM:SSF50800SUPFAM:SSF51621SUPFAM:SSF52935TIGRFAMs:TIGR01064UniPathway:UPA00109
UniParc:UPI0004EDD038SEG:seg::::
Description
BnaC03g43100D
Coordinates
chrLK031885:-:1212330..1215956
Molecular Weight (calculated)
64279.0 Da
IEP (calculated)
6.438
GRAVY (calculated)
-0.135
Length
581 amino acids
Sequence
(BLAST)
001: MSQSIQFSTP SRTPHLLHLP HSRFHRPLTS LSFRQFPLKY TSIRASSSPD LGSSSSSQRS VVATAVSTDT AAIDVDTVTE AELKENGFRS TRRTKLICTI
101: GPATCGFEQL EALAEGGMNV ARLNMCHGTR EWHRDVIRSV RKLNEEKGFA VAIMMDTEGS EIHMGDLGGE SSAKSEDGEV WTFTVRAFDS SRPARTISVS
201: YDGFAEDVRV GDELLVDGGM VRFEVIEKIG PDVKCLCTDP GLLLPRANLT FWRDGSLVRE RNAMLPTISS KDWLDIDFGI AEGVDFIAVS FVKSAEVINH
301: LKSYLAARSC GGDIGVIAKI ESIDSLTNLE EIIIASDGAM VARGDLGAQI PLEQVPAAQQ RIVKVCRALN KPVIVASQLL ESMIEYPTPT RAEVADVSEA
401: VRQRSDALML SGESAMGQFP DKALTVLRSV SLRIERWWRE EKRYESTPLQ PIGSGFSDRI SEEICNSAAK MANNLGVDAV FVYTKDGHMA SLVSRCRPDC
501: PIFAFTTTTS VRRRLNLKWG LIPFRLSFSE DMESNLNKTF SLLKSRGMIK SGDLVIAVSD MLQSIQTYFY IRFLRQQWTM P
Best Arabidopsis Sequence Match ( AT3G22960.1 )
(BLAST)
001: MSQSIQFSTP SHTPHLLHLP HSQFNRPLSS ISFRRFPLTT IKYTSIRASS SSSPSPDLDS SSSSSSSQVL LSPNGTGAVK SDERSVVATA VTTDTSGIEV
101: DTVTEAELKE NGFRSTRRTK LICTIGPATC GFEQLEALAV GGMNVARLNM CHGTRDWHRG VIRSVRRLNE EKGFAVAIMM DTEGSEIHMG DLGGEASAKA
201: EDGEVWTFTV RAFDSSRPER TISVSYDGFA EDVRVGDELL VDGGMVRFEV IEKIGPDVKC LCTDPGLLLP RANLTFWRDG SLVRERNAML PTISSKDWLD
301: IDFGIAEGVD FIAVSFVKSA EVINHLKSYL AARSRGGEIG VIAKIESIDS LTNLEEIILA SDGAMVARGD LGAQIPLEQV PAAQQRIVQV CRALNKPVIV
401: ASQLLESMIE YPTPTRAEVA DVSEAVRQRS DALMLSGESA MGQFPDKALT VLRTVSLRIE RWWREEKRHE SVPLQAIGSS FSDKISEEIC NSAAKMANNL
501: GVDAVFVYTT SGHMASLVSR CRPDCPIFAF TTTTSVRRRL NLQWGLIPFR LSFSDDMESN LNKTFSLLKS RGMIKSGDLV IAVSDMLQSI QVMNVP
Arabidopsis Description
PKP1Plastidial pyruvate kinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.