CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX72718
CDX90305
CDY12116
CDY22394
CDY36901
CDY44976
CDY58069
CDY58070
CDY70805

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61590.1	CDY36901	AT3G48150.1	21798944
AT1G61590.1	CDY44976	AT3G48150.1	21798944
AT1G61590.1	CDY58069	AT3G48150.1	21798944
AT1G61590.1	CDY58070	AT3G48150.1	21798944
AT1G61590.1	CDY70805	AT3G48150.1	21798944
AT1G61590.1	CDX72718	AT4G39050.1	21798944
AT1G61590.1	CDX90305	AT4G39050.1	21798944
AT1G61590.1	CDY12116	AT4G39050.1	21798944
AT1G61590.1	CDY22394	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65103	Canola	plastid	46.43	89.94
CDY52677	Canola	cytosol	21.1	89.04
CDY65104	Canola	cytosol	43.83	79.41
CDY47586	Canola	plastid	92.53	68.35
Bra031421.1-P	Field mustard	plastid	91.88	67.7
CDY26353	Canola	plastid	91.23	66.27
AT1G61590.1	Thale cress	plastid	87.01	63.21
CDY56059	Canola	cytosol	29.55	61.9
VIT_02s0087g00270.t01	Wine grape	plastid	70.45	51.18
PGSC0003DMT400040626	Potato	plastid	69.81	51.07
Solyc08g074980.2.1	Tomato	plastid	69.81	50.95
GSMUA_Achr2P17920_001	Banana	cytosol	62.66	50.52
CDY48175	Canola	plastid	27.92	44.1
KRH07729	Soybean	cytosol	58.44	41.0
HORVU6Hr1G032540.8	Barley	mitochondrion, plastid	55.52	39.77
Zm00001d047437_P001	Maize	plastid	56.17	39.32
Zm00001d029258_P001	Maize	mitochondrion, plastid	54.55	38.89
Os03t0364400-01	Rice	plasma membrane	56.17	38.7
CDY68189	Canola	cytosol	47.4	38.52
TraesCS4D01G166800.1	Wheat	cytosol	55.84	38.48
OQU92552	Sorghum	plastid	54.55	38.44
TraesCS4B01G162700.1	Wheat	cytosol	54.55	37.58
CDX74646	Canola	endoplasmic reticulum, plasma membrane	53.9	36.89
CDY65349	Canola	cytosol	54.22	36.54
CDY33401	Canola	cytosol	54.22	36.54
TraesCS6D01G027700.1	Wheat	cytosol	50.97	36.34
CDX83496	Canola	cytosol, plastid	48.05	36.27
TraesCS6B01G033300.1	Wheat	cytosol	50.97	36.26
CDX68261	Canola	mitochondrion, plastid	46.43	36.11
TraesCS6A01G024300.1	Wheat	cytosol	50.65	36.03
CDY65019	Canola	mitochondrion, plastid	45.78	35.61
CDY20721	Canola	cytosol	45.78	33.98
CDY41811	Canola	cytosol	45.45	33.73
CDX68181	Canola	cytosol	43.18	33.67
CDY47750	Canola	cytosol	45.78	33.57
CDY32778	Canola	cytosol	45.45	33.25
CDY72324	Canola	cytosol, plasma membrane	34.42	33.23
CDX85839	Canola	cytosol	42.53	33.16
CDX96417	Canola	plastid	46.1	31.49
CDX72925	Canola	plastid	46.1	31.35
CDY49854	Canola	nucleus	42.53	30.9
CDY50604	Canola	cytosol	24.35	30.49
CDY66556	Canola	plastid	43.51	30.45
CDX86877	Canola	plastid	42.86	30.34
CDX94273	Canola	cytosol	43.51	30.11
CDY41127	Canola	cytosol	43.51	30.11
CDX77041	Canola	endoplasmic reticulum, plasma membrane	22.73	29.41
CDY49088	Canola	cytosol	34.09	29.41
CDX82145	Canola	plastid	36.36	28.43
CDY39319	Canola	cytosol, plastid	34.09	25.24
CDY52676	Canola	cytosol, nucleus, plastid	11.69	21.05
CDY68998	Canola	cytosol	14.94	19.66
CDY20019	Canola	cytosol	3.57	5.21
CDY65105	Canola	cytosol	0.65	3.57

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078EWA3	EnsemblPlants:CDY03843	ProteinID:CDY03843
ProteinID:CDY03843.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00117303001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF495
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EEE2A2

Description

BnaC01g29600D

Coordinates

chrLK031946:-:1113046..1114686

Molecular Weight (calculated)

34453.3 Da

IEP (calculated)

8.267

GRAVY (calculated)

-0.199

Length

308 amino acids

Sequence
(BLAST)

001: MRDSSPATST KSSPLWKPFA SNCCSVGDQT VLGNLSRCRP SKSDSKNHLG PLPSFRRLSF ADLSRSSSAR INEDLAEALG DDLVDFQMCE LKMITQGFSR
101: NYLLGEGGFG KVYKGYIDEN FRQSLKAQPV AVKLLDIEGL QGHREWLSEV ILLGQLKHPN LVKLIGYCCE EEERVLIYEF MSRGSLENHL FKRISISLPW
201: ATRLKIAVAA AKGLAFLHDL ESPIIYRDFK TSNILLDSDF TAKLSDFGLA TMGPEGSKSH VTTRVMGTYG YAAPEYVSTG VKYTNFLSFP TEFVWPNCFP
301: AIKFKHTY

Best Arabidopsis Sequence Match ( AT1G61590.1 )
(BLAST)

001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS

Arabidopsis Description

PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.