CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68261	Canola	mitochondrion, plastid	97.73	97.73
Bra003875.1-P	Field mustard	mitochondrion, plastid	96.97	96.97
CDX96417	Canola	plastid	89.14	78.27
AT1G72540.1	Thale cress	plastid	88.13	77.56
CDX72925	Canola	plastid	88.64	77.48
CDX82145	Canola	plastid	73.23	73.6
CDY49854	Canola	nucleus	75.51	70.52
CDY65104	Canola	cytosol	25.76	60.0
CDY52677	Canola	cytosol	10.86	58.9
CDY56059	Canola	cytosol	21.21	57.14
Solyc12g049360.1.1	Tomato	vacuole	55.81	52.74
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	55.81	52.12
KRH06195	Soybean	plastid	59.09	51.88
CDY72324	Canola	cytosol, plasma membrane	41.16	51.1
CDY68189	Canola	cytosol	48.23	50.4
KRH47613	Soybean	plastid	58.84	50.32
Solyc06g062920.2.1	Tomato	plastid	57.07	48.71
PGSC0003DMT400012413	Potato	cytosol	57.07	48.71
CDX74646	Canola	endoplasmic reticulum, plasma membrane	54.8	48.22
CDY65349	Canola	cytosol	55.56	48.14
CDY33401	Canola	cytosol	55.56	48.14
CDX83496	Canola	cytosol, plastid	48.48	47.06
VIT_09s0002g01110.t01	Wine grape	mitochondrion	52.27	47.05
CDY03843	Canola	plastid	35.61	45.78
CDY47586	Canola	plastid	47.73	45.32
CDX77041	Canola	endoplasmic reticulum, plasma membrane	26.77	44.54
CDY26353	Canola	plastid	47.22	44.1
CDY48175	Canola	plastid	20.71	42.05
CDY20721	Canola	cytosol	43.69	41.69
CDY41811	Canola	cytosol	43.18	41.2
CDY47750	Canola	cytosol	43.69	41.19
CDY32778	Canola	cytosol	43.69	41.09
CDX86877	Canola	plastid	44.7	40.69
CDY66556	Canola	plastid	44.7	40.23
CDY49088	Canola	cytosol	35.86	39.78
CDX85839	Canola	cytosol	39.14	39.24
CDX68181	Canola	cytosol	39.14	39.24
CDY41127	Canola	cytosol	43.94	39.1
CDX94273	Canola	cytosol	43.94	39.1
CDY68998	Canola	cytosol	21.72	36.75
CDY52676	Canola	cytosol, nucleus, plastid	14.9	34.5
CDY65103	Canola	plastid	13.64	33.96
CDY39319	Canola	cytosol, plastid	35.35	33.65
CDY20019	Canola	cytosol	15.66	29.38
CDY50604	Canola	cytosol	18.18	29.27
CDY65105	Canola	cytosol	2.27	16.07

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078JEB4	UniProt:A0A078JEB4	EnsemblPlants:CDY65019
ProteinID:CDY65019	ProteinID:CDY65019.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00044022001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF227	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EED3C6	SEG:seg	:	:	:

Description

BnaCnng45720DBnaCnng45720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEB4]

Coordinates

chrLK034627:+:15399..16840

Molecular Weight (calculated)

44521.7 Da

IEP (calculated)

9.288

GRAVY (calculated)

-0.296

Length

396 amino acids

Sequence
(BLAST)

001: MKRIRFSWKN TCLPISCINN TNQKTTCTKN PSKERLLLLS KQTSVRSRVY LSDFSNSTIS LNDFSNSFLI DIHILTFEEL KTITQGFSKY NYLGKGGFGE
101: VYKGFADDSV KTGLKAQPVA VKALKREGGQ GHREWLAEVV ILGQLKHPNL VNLIGYCCED DHRLLVYEYM ERGNLEDHLF QKYGGALPWL TRVKILLGAA
201: KGLDFLHKEE KPVIYRDFKP SNILLSSDYS SKLSDFGLAT DGSEADDADF TKSVMGTEGY AAPEYISAGH LTTMSDVFSF GVVLLEMLTA RKAVKKYRSQ
301: RGRNLVEWAR PMLKDPNKLE QIIDPSLEGR YSLEGIRKAA VLAYQCLSHN PKSRPTMATV VKTLERILDL KDIQNGPFVY IVPVAGANKV HDIKCN

Best Arabidopsis Sequence Match ( AT1G72540.1 )
(BLAST)

001: MRFSWKNICL PISCINNTNQ KKTTTTNPPK EKLLLLSRQT SVPSRVYMSD FSNSTISLND FSNSFFINIH IFTYEELKTI TQGFSKYNFL GEGGFGEVYK
101: GFVDDSLKTG LKDQPVAVKA LKREGGQGHR EWLAEVIILG QLKHPHLVNL VGYCCEDDER LLVYEYMERG NLEDHLFQKY GGALPWLTRV KILLGAAKGL
201: EFLHKQEKPV IYRDFKPSNI LLSSDFSSKL SDFGLATDGS EEEDSNFTKS VMGTEGYAAP EYISAGNLTT MSDVFSFGVV LLEMLTARKA VEKYRAQRGR
301: NLVEWARPML KDPNKLERII DPSLEGKYSV EGIRKAAALA YQCLSHNPKS RPTMTTVVKT LEPILDLKDI QNGPFVYIVP VAGVSEVHEI KCKDDVKVVK
401: EETEKDAKVF PRHRAGRRNR RKHKAMRSRA VYSDTALYKS LGTSLYNPAN

Arabidopsis Description

Putative receptor-like protein kinase At1g72540 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.