CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016050.1-P	Field mustard	plastid	98.23	98.23
CDX72925	Canola	plastid	96.9	96.47
AT1G72540.1	Thale cress	plastid	89.8	90.0
CDX68261	Canola	mitochondrion, plastid	78.49	89.39
CDY65019	Canola	mitochondrion, plastid	78.27	89.14
CDX82145	Canola	plastid	72.95	83.5
CDY49854	Canola	nucleus	75.61	80.42
CDY65104	Canola	cytosol	22.62	60.0
CDY52677	Canola	cytosol	9.53	58.9
KRH06195	Soybean	plastid	56.32	56.32
CDY56059	Canola	cytosol	18.18	55.78
KRH47613	Soybean	plastid	56.32	54.86
Solyc12g049360.1.1	Tomato	vacuole	49.89	53.7
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	49.45	52.59
CDY72324	Canola	cytosol, plasma membrane	36.81	52.04
CDY68189	Canola	cytosol	43.24	51.45
PGSC0003DMT400012413	Potato	cytosol	52.33	50.86
Solyc06g062920.2.1	Tomato	plastid	51.88	50.43
CDY65349	Canola	cytosol	51.0	50.33
CDY33401	Canola	cytosol	51.0	50.33
VIT_09s0002g01110.t01	Wine grape	mitochondrion	48.34	49.55
CDX74646	Canola	endoplasmic reticulum, plasma membrane	49.22	49.33
CDX77041	Canola	endoplasmic reticulum, plasma membrane	25.94	49.16
CDX83496	Canola	cytosol, plastid	43.68	48.28
CDY03843	Canola	plastid	31.49	46.1
CDY48175	Canola	plastid	19.73	45.64
CDY47586	Canola	plastid	42.13	45.56
CDY26353	Canola	plastid	41.91	44.58
CDY20721	Canola	cytosol	40.13	43.61
CDY41811	Canola	cytosol	39.69	43.13
CDY32778	Canola	cytosol	40.13	42.99
CDY47750	Canola	cytosol	39.69	42.62
CDX86877	Canola	plastid	40.13	41.61
CDX68181	Canola	cytosol	36.14	41.27
CDY66556	Canola	plastid	40.13	41.14
CDX85839	Canola	cytosol	35.92	41.01
CDX94273	Canola	cytosol	40.35	40.9
CDY41127	Canola	cytosol	40.13	40.67
CDY68998	Canola	cytosol	21.06	40.6
CDY49088	Canola	cytosol	31.26	39.5
CDY52676	Canola	cytosol, nucleus, plastid	13.53	35.67
CDY65103	Canola	plastid	12.42	35.22
CDY39319	Canola	cytosol, plastid	31.04	33.65
CDY20019	Canola	cytosol	15.08	32.23
CDY50604	Canola	cytosol	16.19	29.67
CDY65105	Canola	cytosol	2.0	16.07

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078E5R0	EnsemblPlants:CDX96417	ProteinID:CDX96417
ProteinID:CDX96417.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00102580001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF227	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE1C28
SEG:seg	:	:	:	:	:

Description

BnaA07g30280D

Coordinates

chrLK031894:-:750003..751685

Molecular Weight (calculated)

50711.1 Da

IEP (calculated)

9.596

GRAVY (calculated)

-0.407

Length

451 amino acids

Sequence
(BLAST)

001: MKAMRFSWKN ICLPISCMND TNLKKTTTNP SKEKLLLLTR QTSVPSRVYL SDFSNSTISL NDFSNSFLTD IHIFTLEELK TITQGFSKHN YLGEGGFGEV
101: YKGFVDDSLK IGLKAQPVAV KALKREGGQG HREWLAEVII LGQLKHPHLV NLIGYCCEDD HRLLVYEYME RGNLEDHLFQ KYGGALPWLT RVKILLGAAK
201: GLDFLHKGKK PVIYRDFKPS NILLSSDYSS KLSDFGLATD GSEAEDSNFT KNVMGTEGYA APEYISAGNL TTMSDVFSFG VVLLEMLTAR KAVEKYRSSQ
301: RGRNLVEWAR PMLKDPNKLE RIIDPSLEGR YSLEGIRKAA ALAYQCLSHN PKSRPTMTTV VKTLGPILDL KDIQNGPFVY IVPVAGANDI TCKDDDAKVT
401: KEETEKEAKV CPRHRAGRRR RRKHRAMKSR AVYSDTTLYK SLGTSLYTQA E

Best Arabidopsis Sequence Match ( AT1G72540.1 )
(BLAST)

001: MRFSWKNICL PISCINNTNQ KKTTTTNPPK EKLLLLSRQT SVPSRVYMSD FSNSTISLND FSNSFFINIH IFTYEELKTI TQGFSKYNFL GEGGFGEVYK
101: GFVDDSLKTG LKDQPVAVKA LKREGGQGHR EWLAEVIILG QLKHPHLVNL VGYCCEDDER LLVYEYMERG NLEDHLFQKY GGALPWLTRV KILLGAAKGL
201: EFLHKQEKPV IYRDFKPSNI LLSSDFSSKL SDFGLATDGS EEEDSNFTKS VMGTEGYAAP EYISAGNLTT MSDVFSFGVV LLEMLTARKA VEKYRAQRGR
301: NLVEWARPML KDPNKLERII DPSLEGKYSV EGIRKAAALA YQCLSHNPKS RPTMTTVVKT LEPILDLKDI QNGPFVYIVP VAGVSEVHEI KCKDDVKVVK
401: EETEKDAKVF PRHRAGRRNR RKHKAMRSRA VYSDTALYKS LGTSLYNPAN

Arabidopsis Description

Putative receptor-like protein kinase At1g72540 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.