CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94273	Canola	cytosol	98.72	51.91
CDY41127	Canola	cytosol	98.29	51.69
Bra033198.1-P	Field mustard	cytosol	96.15	50.56
CDX86877	Canola	plastid	89.32	48.05
CDY66556	Canola	plastid	89.32	47.5
AT2G07180.1	Thale cress	cytosol	85.9	45.48
CDY52676	Canola	cytosol, nucleus, plastid	29.49	40.35
CDX77041	Canola	endoplasmic reticulum, plasma membrane	39.74	39.08
KRH41391	Soybean	cytosol	56.84	35.09
GSMUA_Achr10P...	Banana	cytosol	50.0	34.93
KRH60107	Soybean	cytosol	55.98	34.56
CDY72324	Canola	cytosol, plasma membrane	46.15	33.86
GSMUA_Achr7P19720_001	Banana	cytosol	49.15	33.53
PGSC0003DMT400035255	Potato	cytosol	63.25	33.48
Solyc07g042590.2.1	Tomato	cytosol	62.82	33.26
CDY65104	Canola	cytosol	23.93	32.94
VIT_11s0065g00470.t01	Wine grape	cytosol	64.1	32.89
PGSC0003DMT400007503	Potato	cytosol	51.28	32.0
Solyc12g009310.1.1	Tomato	cytosol	51.28	32.0
Os06t0663200-01	Rice	cytosol, plasma membrane	61.54	30.7
KXG20556	Sorghum	cytosol	59.4	29.83
Zm00001d046939_P001	Maize	cytosol	59.4	29.76
TraesCS7D01G474600.1	Wheat	cytosol	60.26	29.56
CDY68189	Canola	cytosol	47.86	29.55
CDY20019	Canola	cytosol	26.5	29.38
TraesCS7B01G391200.1	Wheat	cytosol	59.83	29.35
TraesCS7A01G487900.1	Wheat	cytosol	59.83	29.23
TraesCS7B01G316100.1	Wheat	cytosol	47.44	28.76
GSMUA_Achr7P04920_001	Banana	cytosol	54.7	28.57
TraesCS7A01G416100.1	Wheat	mitochondrion	45.73	28.01
TraesCS7D01G409400.1	Wheat	cytosol	45.73	28.01
CDX83496	Canola	cytosol, plastid	47.86	27.45
HORVU7Hr1G109590.5	Barley	plasma membrane	59.83	26.98
KXG20794	Sorghum	plastid	43.59	26.7
Os06t0703000-01	Rice	plasma membrane	45.3	26.37
Zm00001d036656_P003	Maize	cytosol	55.13	26.27
CDY41811	Canola	cytosol	46.58	26.27
CDY20721	Canola	cytosol	46.58	26.27
GSMUA_Achr4P09620_001	Banana	cytosol	47.44	26.18
CDY47750	Canola	cytosol	45.73	25.48
CDY32778	Canola	cytosol	45.73	25.42
HORVU7Hr1G096400.1	Barley	peroxisome, plastid	37.18	23.84
CDY56059	Canola	cytosol	14.96	23.81
CDX74646	Canola	endoplasmic reticulum, plasma membrane	45.73	23.78
CDY47586	Canola	plastid	42.31	23.74
CDY33401	Canola	cytosol	46.15	23.63
CDY65349	Canola	cytosol	46.15	23.63
CDX82145	Canola	plastid	39.32	23.35
CDY26353	Canola	plastid	42.31	23.35
CDY49088	Canola	cytosol	34.19	22.41
CDX68181	Canola	cytosol	37.61	22.28
CDX85839	Canola	cytosol	37.61	22.28
CDY49854	Canola	nucleus	39.74	21.93
CDX68261	Canola	mitochondrion, plastid	36.75	21.72
CDY65019	Canola	mitochondrion, plastid	36.75	21.72
CDY65105	Canola	cytosol	5.13	21.43
CDX72925	Canola	plastid	41.45	21.41
CDX96417	Canola	plastid	40.6	21.06
CDY39319	Canola	cytosol, plastid	35.47	19.95
CDY03843	Canola	plastid	19.66	14.94
Zm00001d036459_P005	Maize	mitochondrion, plastid	24.79	14.68
Zm00001d014697_P002	Maize	mitochondrion	25.21	14.46
GSMUA_Achr3P27770_001	Banana	cytosol	47.86	13.58
CDY50604	Canola	cytosol	3.42	3.25
CDY65103	Canola	plastid	1.71	2.52
CDY48175	Canola	plastid	1.71	2.05
CDY52677	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:A0A078JN95	UniProt:A0A078JN95	EnsemblPlants:CDY68998	ProteinID:CDY68998
ProteinID:CDY68998.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00081994001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF190	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE368B	SEG:seg	:

Description

BnaCnng61340DBnaCnng61340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JN95]

Coordinates

chrLK038430:+:1..1109

Molecular Weight (calculated)

25850.8 Da

IEP (calculated)

8.744

GRAVY (calculated)

-0.584

Length

234 amino acids

Sequence
(BLAST)

001: IIYRDLKTAN ILLDECYNAK LADFGLAKDG PRGDQTHVST RVMGTYGYAA PEYVMTGHLT SRSDVYGYGV LLLEMLLGKR AMDKSRPCRE HNLVEWARPL
101: LNHNKKLLRI IDPRMDGQYT TKALMKVADL AYQCLSQNPK GRPLMSHAVQ VLETLKEDGD AQGEVMASLH SRGKSVTLHE AAPSDSQGTR NVDGDGQGQR
201: RRRPESGRSK SEASVDTDLY VSALVSSDPN ATKT

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.