CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX72718
CDX90305
CDY12116
CDY22394
CDY36901
CDY44976
CDY58069
CDY58070
CDY70805

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61590.1	CDY36901	AT3G48150.1	21798944
AT1G61590.1	CDY44976	AT3G48150.1	21798944
AT1G61590.1	CDY58069	AT3G48150.1	21798944
AT1G61590.1	CDY58070	AT3G48150.1	21798944
AT1G61590.1	CDY70805	AT3G48150.1	21798944
AT1G61590.1	CDX72718	AT4G39050.1	21798944
AT1G61590.1	CDX90305	AT4G39050.1	21798944
AT1G61590.1	CDY12116	AT4G39050.1	21798944
AT1G61590.1	CDY22394	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65105	Canola	cytosol	22.81	69.64
AT1G61590.1	Thale cress	plastid	85.38	34.43
CDY26353	Canola	plastid	84.8	34.2
CDY47586	Canola	plastid	83.04	34.05
CDY68998	Canola	cytosol	40.35	29.49
CDY65104	Canola	cytosol	26.9	27.06
VIT_02s0087g00270.t01	Wine grape	plastid	63.16	25.47
CDY20019	Canola	cytosol	30.41	24.64
PGSC0003DMT400040626	Potato	plastid	59.65	24.23
CDX77041	Canola	endoplasmic reticulum, plasma membrane	33.33	23.95
Solyc08g074980.2.1	Tomato	plastid	59.06	23.93
CDY72324	Canola	cytosol, plasma membrane	42.11	22.57
Os03t0364400-01	Rice	plasma membrane	57.89	22.15
HORVU6Hr1G032540.8	Barley	mitochondrion, plastid	53.8	21.4
Zm00001d029258_P001	Maize	mitochondrion, plastid	53.8	21.3
GSMUA_Achr2P17920_001	Banana	cytosol	47.37	21.2
OQU92552	Sorghum	plastid	53.8	21.05
TraesCS6A01G024300.1	Wheat	cytosol	53.22	21.02
TraesCS4D01G166800.1	Wheat	cytosol	54.39	20.81
KRH07729	Soybean	cytosol	53.22	20.73
Zm00001d047437_P001	Maize	plastid	53.22	20.68
TraesCS6B01G033300.1	Wheat	cytosol	52.05	20.55
TraesCS6D01G027700.1	Wheat	cytosol	51.46	20.37
TraesCS4B01G162700.1	Wheat	cytosol	53.22	20.36
CDY68189	Canola	cytosol	42.69	19.26
CDY49088	Canola	cytosol	39.77	19.05
CDX68181	Canola	cytosol	42.11	18.23
CDX85839	Canola	cytosol	42.11	18.23
CDX83496	Canola	cytosol, plastid	42.69	17.89
CDY41811	Canola	cytosol	40.94	16.87
CDY20721	Canola	cytosol	40.35	16.63
CDY32778	Canola	cytosol	40.35	16.39
CDY47750	Canola	cytosol	39.77	16.19
CDX74646	Canola	endoplasmic reticulum, plasma membrane	42.11	16.0
CDY65349	Canola	cytosol	42.11	15.75
CDY33401	Canola	cytosol	42.11	15.75
CDX86877	Canola	plastid	39.77	15.63
CDY39319	Canola	cytosol, plastid	38.01	15.62
CDX94273	Canola	cytosol	40.35	15.51
CDY41127	Canola	cytosol	40.35	15.51
CDY66556	Canola	plastid	39.77	15.45
CDX82145	Canola	plastid	35.09	15.23
CDX68261	Canola	mitochondrion, plastid	34.5	14.9
CDY65019	Canola	mitochondrion, plastid	34.5	14.9
CDY49854	Canola	nucleus	35.09	14.15
CDX96417	Canola	plastid	35.67	13.53
CDX72925	Canola	plastid	35.67	13.47
CDY03843	Canola	plastid	21.05	11.69
CDY56059	Canola	cytosol	8.77	10.2
CDY50604	Canola	cytosol	4.09	2.85
CDY48175	Canola	plastid	1.75	1.54
CDY65103	Canola	plastid	0.0	0.0
CDY52677	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:A0A078IS43	UniProt:A0A078IS43	EnsemblPlants:CDY52676	ProteinID:CDY52676
ProteinID:CDY52676.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00007572001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF495	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
UniParc:UPI0004EEF7BD	:	:	:	:	:

Description

BnaC09g51390DBnaC09g51390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS43]

Coordinates

chrLK033116:-:33736..38605

Molecular Weight (calculated)

18752.4 Da

IEP (calculated)

10.690

GRAVY (calculated)

-0.579

Length

171 amino acids

Sequence
(BLAST)

001: MGPEGSKSHV TTRVMGTYGY AAPENVSPGN LTTKSDVYSY GVVLLELLTG RRATDKSWPK NQQNIIDWAK PYLTSSRRLR CVMDQRLASQ YSVKADKDTA
101: LLALQCVSPN PKDRPKMPAV LFSESVTFAR YMAVSSGHWP PSPRSQGGKV SLKVRGDNRS GRKSASGSLR T

Best Arabidopsis Sequence Match ( AT1G61590.1 )
(BLAST)

001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS

Arabidopsis Description

PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.