Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52677 | Canola | cytosol | 28.57 | 57.53 |
| CDY65104 | Canola | cytosol | 55.1 | 47.65 |
| HORVU2Hr1G095950.2 | Barley | cytosol | 35.37 | 37.68 |
| HORVU7Hr1G088710.2 | Barley | cytosol | 57.82 | 33.2 |
| CDY03843 | Canola | plastid | 61.9 | 29.55 |
| TraesCS5A01G497700.1 | Wheat | mitochondrion, plastid | 44.22 | 28.02 |
| TraesCS4B01G325400.1 | Wheat | mitochondrion, plastid | 44.22 | 28.02 |
| CDY72324 | Canola | cytosol, plasma membrane | 60.54 | 27.9 |
| CDX85839 | Canola | cytosol | 73.47 | 27.34 |
| CDX68181 | Canola | cytosol | 73.47 | 27.34 |
| CDX77041 | Canola | endoplasmic reticulum, plasma membrane | 41.5 | 25.63 |
| CDY68189 | Canola | cytosol | 65.99 | 25.59 |
| CDY49088 | Canola | cytosol | 61.9 | 25.49 |
| CDX83496 | Canola | cytosol, plastid | 65.99 | 23.77 |
| CDY20721 | Canola | cytosol | 63.95 | 22.65 |
| CDY47586 | Canola | plastid | 63.95 | 22.54 |
| CDX74646 | Canola | endoplasmic reticulum, plasma membrane | 68.71 | 22.44 |
| CDY41811 | Canola | cytosol | 63.27 | 22.41 |
| CDY47750 | Canola | cytosol | 63.95 | 22.38 |
| CDY65349 | Canola | cytosol | 69.39 | 22.32 |
| CDY33401 | Canola | cytosol | 69.39 | 22.32 |
| CDY26353 | Canola | plastid | 63.95 | 22.17 |
| CDY32778 | Canola | cytosol | 63.27 | 22.09 |
| CDY39319 | Canola | cytosol, plastid | 61.9 | 21.88 |
| CDX86877 | Canola | plastid | 63.95 | 21.61 |
| CDY66556 | Canola | plastid | 63.95 | 21.36 |
| CDY41127 | Canola | cytosol | 64.63 | 21.35 |
| CDX94273 | Canola | cytosol | 64.63 | 21.35 |
| CDY65019 | Canola | mitochondrion, plastid | 57.14 | 21.21 |
| CDY48175 | Canola | plastid | 27.89 | 21.03 |
| CDX68261 | Canola | mitochondrion, plastid | 56.46 | 20.96 |
| CDY50604 | Canola | cytosol | 34.69 | 20.73 |
| CDY49854 | Canola | nucleus | 56.46 | 19.58 |
| CDX82145 | Canola | plastid | 52.38 | 19.54 |
| CDX96417 | Canola | plastid | 55.78 | 18.18 |
| CDX72925 | Canola | plastid | 55.78 | 18.1 |
| CDY68998 | Canola | cytosol | 23.81 | 14.96 |
| CDY65103 | Canola | plastid | 12.24 | 11.32 |
| CDY52676 | Canola | cytosol, nucleus, plastid | 10.2 | 8.77 |
| CDY20019 | Canola | cytosol | 1.36 | 0.95 |
| CDY65105 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:3.30.200.20 | MapMan:50.2.7 | GO:A0A078J1U9 | UniProt:A0A078J1U9 | EnsemblPlants:CDY56059 |
| ProteinID:CDY56059 | ProteinID:CDY56059.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00017722001 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF07714 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF160 |
| InterPro:Prot_kinase_dom | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EECC25 | : |
Description
BnaCnng29780DBnaCnng29780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1U9]
Coordinates
chrLK033452:+:8781..9937
Molecular Weight (calculated)
16719.5 Da
IEP (calculated)
9.963
GRAVY (calculated)
-0.210
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVAVKKLKS EGFQGHKEWL NVVHYLGRLH HMNLVKLIGY CLEGEKRLLV YEYMPKGSLE NHLFRRSSDP IPWNTRMKVA ISAARGLAFL HEAKVIYRDF
101: KASNILLDVE FNAKLSDFGL AKAGPTGDRT HVTTQMMGTQ GYELLNT
101: KASNILLDVE FNAKLSDFGL AKAGPTGDRT HVTTQMMGTQ GYELLNT
001: MGNCFGFSAK VGNRESPYRG SSRISAKRSQ SSRLSSLTIQ SSSYNDDTSV ASLQTPRSEG ELLASPTLKA FTFNELKTAT RNFRPDSVIG EGGFGYVYKG
101: WIDERTLSPS KPGSGMVVAV KKLKEEGFQG HRQWLAEVDC LGRLHHMNLV KLIGYCSKGD HIRLLVYEYM PKGSLENHLF RRGAEPIPWR TRIKVAIGAA
201: RGLAFLHEAQ VIYRDFKASN ILLDSEFNAK LSDFGLAKVG PTGDRTHVST QVMGTQGYAA PEYVATGRIT AKSDVYSFGV VLLELLSGRL TVDKTKVGVE
301: RNLVDWAIPY LGDKRKVFRI MDTKLGGQYP HKGACLTANT ALQCLNQEPK LRPKMSDVLS TLEELEMTLK SGSISNSVMK LTSSSSSFTA KQRVRTPVAD
401: PVLSSRRCRR VR
101: WIDERTLSPS KPGSGMVVAV KKLKEEGFQG HRQWLAEVDC LGRLHHMNLV KLIGYCSKGD HIRLLVYEYM PKGSLENHLF RRGAEPIPWR TRIKVAIGAA
201: RGLAFLHEAQ VIYRDFKASN ILLDSEFNAK LSDFGLAKVG PTGDRTHVST QVMGTQGYAA PEYVATGRIT AKSDVYSFGV VLLELLSGRL TVDKTKVGVE
301: RNLVDWAIPY LGDKRKVFRI MDTKLGGQYP HKGACLTANT ALQCLNQEPK LRPKMSDVLS TLEELEMTLK SGSISNSVMK LTSSSSSFTA KQRVRTPVAD
401: PVLSSRRCRR VR
Arabidopsis Description
PBL4Probable serine/threonine-protein kinase PBL4 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP29]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.