Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68181 | Canola | cytosol | 98.23 | 98.23 |
| AT1G74490.1 | Thale cress | cytosol | 84.05 | 83.21 |
| CDY56059 | Canola | cytosol | 27.34 | 73.47 |
| CDY50604 | Canola | cytosol | 42.28 | 67.89 |
| CDY65104 | Canola | cytosol | 26.58 | 61.76 |
| HORVU2Hr1G095950.2 | Barley | cytosol | 21.27 | 60.87 |
| CDY52677 | Canola | cytosol | 10.89 | 58.9 |
| VIT_17s0000g05890.t01 | Wine grape | cytosol | 42.78 | 55.41 |
| TraesCS5A01G497700.1 | Wheat | mitochondrion, plastid | 30.89 | 52.59 |
| TraesCS4B01G325400.1 | Wheat | mitochondrion, plastid | 30.63 | 52.16 |
| HORVU7Hr1G088710.2 | Barley | cytosol | 31.65 | 48.83 |
| CDY49088 | Canola | cytosol | 44.05 | 48.74 |
| CDY68189 | Canola | cytosol | 45.32 | 47.23 |
| CDX77041 | Canola | endoplasmic reticulum, plasma membrane | 28.1 | 46.64 |
| CDX83496 | Canola | cytosol, plastid | 46.84 | 45.34 |
| CDY72324 | Canola | cytosol, plasma membrane | 35.95 | 44.51 |
| CDY47586 | Canola | plastid | 46.84 | 44.36 |
| CDY26353 | Canola | plastid | 47.09 | 43.87 |
| CDY39319 | Canola | cytosol, plastid | 45.06 | 42.79 |
| CDY03843 | Canola | plastid | 33.16 | 42.53 |
| CDY20721 | Canola | cytosol | 44.3 | 42.17 |
| CDY52676 | Canola | cytosol, nucleus, plastid | 18.23 | 42.11 |
| CDY41811 | Canola | cytosol | 44.05 | 41.93 |
| CDY47750 | Canola | cytosol | 44.3 | 41.67 |
| CDY32778 | Canola | cytosol | 44.05 | 41.33 |
| CDY33401 | Canola | cytosol | 46.58 | 40.26 |
| CDY65349 | Canola | cytosol | 46.58 | 40.26 |
| CDX86877 | Canola | plastid | 44.3 | 40.23 |
| CDY66556 | Canola | plastid | 44.56 | 40.0 |
| CDX74646 | Canola | endoplasmic reticulum, plasma membrane | 45.06 | 39.56 |
| CDX94273 | Canola | cytosol | 44.56 | 39.55 |
| CDY41127 | Canola | cytosol | 44.56 | 39.55 |
| CDX68261 | Canola | mitochondrion, plastid | 39.49 | 39.39 |
| CDY65019 | Canola | mitochondrion, plastid | 39.24 | 39.14 |
| CDY68998 | Canola | cytosol | 22.28 | 37.61 |
| CDY48175 | Canola | plastid | 18.23 | 36.92 |
| CDX72925 | Canola | plastid | 41.27 | 35.98 |
| CDX96417 | Canola | plastid | 41.01 | 35.92 |
| CDY49854 | Canola | nucleus | 38.23 | 35.61 |
| CDX82145 | Canola | plastid | 34.68 | 34.77 |
| CDY65103 | Canola | plastid | 11.9 | 29.56 |
| CDY20019 | Canola | cytosol | 15.7 | 29.38 |
| CDY65105 | Canola | cytosol | 2.53 | 17.86 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.37.1 | Gene3D:3.30.200.20 | GO:A0A078DBW0 | EnsemblPlants:CDX85839 | ProteinID:CDX85839 |
| ProteinID:CDX85839.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00143622001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF07714 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 |
| PANTHER:PTHR27001:SF160 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0004EEA838 | : | : | : | : | : |
Description
BnaC06g22950D
Coordinates
chrLK031843:-:186477..188456
Molecular Weight (calculated)
44381.1 Da
IEP (calculated)
9.372
GRAVY (calculated)
-0.444
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCFESCSK KNDNKSENVD SSVKLKPFSQ GDSDSERISN LSYPWSLKPL ITRKSEASSA LHAPSREGDV MHPQHLKSFT LDELRNATGN FCPESLIGEG
101: GFGFVYKGCI NGGPRIDLAV AVKKLKIEGF QGHKEWQREV NYLGRLHHPN LVKLIGYSLE DENRLLIYEY MPNGSLENHL FERGSNVLSW SLRMKIAIGA
201: ARGLCFLHDA KDQVIYRDFK ASNILLDSGF NAKLSDFGLA REGPKDDRSH VTTEVIGTQG YAAPEYLATG HLTTRCDVYS FGVVLLEILS GRRAIDKSRA
301: REEENLVEWA KPYLRDKRKV FRIMDTKLVG QYPQKAAFMM SFLALQCIGE VKVRPSMPEV LSLLEKVPNP RHRKSRSKGF ATNSSSVFKT VSQTH
101: GFGFVYKGCI NGGPRIDLAV AVKKLKIEGF QGHKEWQREV NYLGRLHHPN LVKLIGYSLE DENRLLIYEY MPNGSLENHL FERGSNVLSW SLRMKIAIGA
201: ARGLCFLHDA KDQVIYRDFK ASNILLDSGF NAKLSDFGLA REGPKDDRSH VTTEVIGTQG YAAPEYLATG HLTTRCDVYS FGVVLLEILS GRRAIDKSRA
301: REEENLVEWA KPYLRDKRKV FRIMDTKLVG QYPQKAAFMM SFLALQCIGE VKVRPSMPEV LSLLEKVPNP RHRKSRSKGF ATNSSSVFKT VSQTH
001: MGNCFESCSK RNDNEDDNLD SSVNSKPFSR ANSDTGRSSN LSYPWSLKPL ITRKCEAISA LPPPHKEGDI MHSQYLKSFT LDELKNATGN FCPESLIGEG
101: GFGFVHKGCI NGGPGIELAV AVKKLKTEGL QGHKEWLREV NYLGRLHHPN LVKLIGYSLE NEHRLLVYEH LPNGSLENHL FERSSSVLSW SLRMKVAIGA
201: ARGLCFLHEA NDQVIYRDFK AANILLDSGF NAKLSDFGLA KEGPKDNRSH VTTEVMGTEG YAAPEYLATG HLTTKCDVYS FGVVLLEILS GRRVIDKSKS
301: REEENLVDWA TPYLRDKRKV FRIMDTKLVG QYPQKAAFMM SFLALQCIGD VKVRPSMLEV VSLLEKVPIP RHRKSRSKGF ACTNSASMPS KRFLRHPKD
101: GFGFVHKGCI NGGPGIELAV AVKKLKTEGL QGHKEWLREV NYLGRLHHPN LVKLIGYSLE NEHRLLVYEH LPNGSLENHL FERSSSVLSW SLRMKVAIGA
201: ARGLCFLHEA NDQVIYRDFK AANILLDSGF NAKLSDFGLA KEGPKDNRSH VTTEVMGTEG YAAPEYLATG HLTTKCDVYS FGVVLLEILS GRRVIDKSKS
301: REEENLVDWA TPYLRDKRKV FRIMDTKLVG QYPQKAAFMM SFLALQCIGD VKVRPSMLEV VSLLEKVPIP RHRKSRSKGF ACTNSASMPS KRFLRHPKD
Arabidopsis Description
At1g74490 [Source:UniProtKB/TrEMBL;Acc:Q7Y224]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.