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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 4
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • golgi 3
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034302.1-P Field mustard plastid 95.38 53.54
CDY65104 Canola cytosol 34.03 47.65
AT2G26290.1 Thale cress mitochondrion 81.93 45.99
CDY56059 Canola cytosol 25.63 41.5
CDY72324 Canola cytosol, plasma membrane 55.46 41.38
CDY68998 Canola cytosol 39.08 39.74
KRH52268 Soybean plastid 54.2 34.49
KRH05309 Soybean plastid 55.04 33.94
KRH61599 Soybean plasma membrane 53.78 33.68
CDY52676 Canola cytosol, nucleus, plastid 23.95 33.33
CDY68189 Canola cytosol 52.52 32.98
KRH15727 Soybean cytosol, mitochondrion, plastid 53.78 32.9
VIT_04s0008g02070.t01 Wine grape cytosol 60.5 32.73
CDX83496 Canola cytosol, plastid 52.52 30.64
PGSC0003DMT400033828 Potato cytosol 55.04 30.25
Solyc08g061250.2.1 Tomato cytosol 55.46 30.21
CDX74646 Canola endoplasmic reticulum, plasma membrane 56.3 29.78
CDY33401 Canola cytosol 56.3 29.32
CDY65349 Canola cytosol 56.3 29.32
CDY20721 Canola cytosol 50.84 29.16
CDX82145 Canola plastid 47.9 28.93
CDY41811 Canola cytosol 50.42 28.92
CDX85839 Canola cytosol 46.64 28.1
CDY47750 Canola cytosol 49.58 28.1
CDY49854 Canola nucleus 50.0 28.07
CDY32778 Canola cytosol 49.58 28.03
CDX68181 Canola cytosol 46.22 27.85
CDY49088 Canola cytosol 41.6 27.73
CDX86877 Canola plastid 50.0 27.36
CDY66556 Canola plastid 50.0 27.05
CDY65019 Canola mitochondrion, plastid 44.54 26.77
CDX68261 Canola mitochondrion, plastid 44.54 26.77
CDX94273 Canola cytosol 50.0 26.74
CDY41127 Canola cytosol 50.0 26.74
CDX72925 Canola plastid 50.42 26.49
CDX96417 Canola plastid 49.16 25.94
CDY47586 Canola plastid 44.54 25.42
CDY26353 Canola plastid 44.96 25.24
CDY20019 Canola cytosol 22.27 25.12
CDY39319 Canola cytosol, plastid 42.86 24.52
CDY03843 Canola plastid 29.41 22.73
CDY52677 Canola cytosol 6.72 21.92
CDY50604 Canola cytosol 7.14 6.91
CDY48175 Canola plastid 5.46 6.67
CDY65103 Canola plastid 3.78 5.66
CDY65105 Canola cytosol 1.26 5.36
Protein Annotations
Gene3D:1.10.510.10MapMan:50.2.7GO:A0A078CIQ6EnsemblPlants:CDX77041ProteinID:CDX77041ProteinID:CDX77041.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00127611001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF15InterPro:Prot_kinase_domSUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMUniParc:UPI0004EE75A2SEG:seg::
Description
BnaC04g38360D
Coordinates
chrLK031809:-:631442..632529
Molecular Weight (calculated)
27064.6 Da
IEP (calculated)
10.086
GRAVY (calculated)
-0.459
Length
238 amino acids
Sequence
(BLAST)
001: MFSFFAILAL HLVIEEASQN RNSVAMAWGI RMKIALGAAK GLAFLHEAEK PVIYRDFKTS NILLDCNYNA KLSDFGLAKD GPEGEHTHVT TRVMGTQGYA
101: APEYIMTGHL TTMNDVYSFG VVLLELITGK RSVDTTRARR EQSLVEWARP MLRDQRKLDR IIDPRLECQY KTEAAQAAAA LAFKEVETKE RNSNNKETKK
201: FVDKRIIRHH RKGQKRVNIA YSDSLLYKES RAKQNNGV
Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)
001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY
Arabidopsis Description
RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.