CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 2
nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15727	Soybean	cytosol, mitochondrion, plastid	96.89	96.14
KRH52268	Soybean	plastid	80.57	83.16
KRH61599	Soybean	plasma membrane	81.09	82.37
VIT_04s0008g02070.t01	Wine grape	cytosol	71.76	62.95
AT2G26290.1	Thale cress	mitochondrion	63.73	58.02
Bra034302.1-P	Field mustard	plastid	63.47	57.78
PGSC0003DMT400033828	Potato	cytosol	64.51	57.51
Solyc08g061250.2.1	Tomato	cytosol	64.77	57.21
KRH19325	Soybean	nucleus	65.28	55.88
KRH12542	Soybean	cytosol	65.8	55.46
CDX77041	Canola	endoplasmic reticulum, plasma membrane	33.94	55.04
CDY48175	Canola	plastid	27.72	54.87
KRH02603	Soybean	nucleus	64.77	54.82
KRH37497	Soybean	plastid	65.54	54.64
KRH59124	Soybean	cytosol, mitochondrion	53.37	53.93
KRH06195	Soybean	plastid	62.18	53.22
KRH43007	Soybean	cytosol	52.07	52.76
KRH39720	Soybean	plastid	57.51	52.48
KRH47613	Soybean	plastid	61.92	51.62
KRH41391	Soybean	cytosol	50.52	51.45
KRH60107	Soybean	cytosol	50.52	51.45
KRH76414	Soybean	plastid	57.25	49.77
KRH13000	Soybean	cytosol	22.8	49.44
KRH40618	Soybean	cytosol	54.15	48.38
KRH07729	Soybean	cytosol	54.92	48.29
KRH00549	Soybean	cytosol	54.15	47.39
KRG93514	Soybean	cytosol	27.98	44.44
KRG93513	Soybean	plastid	39.38	38.48
KRG93548	Soybean	cytosol	39.12	33.71

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	EMBL:ACUP02010725	EnsemblPlantsGene:GLYMA_17G219200
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	UniProt:I1MX09	InterPro:IPR000719	EnsemblPlants:KRH05309	ProteinID:KRH05309
ProteinID:KRH05309.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF15	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00023D5846	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:37082064..37085069

Molecular Weight (calculated)

43551.6 Da

IEP (calculated)

8.622

GRAVY (calculated)

-0.256

Length

386 amino acids

Sequence
(BLAST)

001: MSTKKNTWKS VILILSCYKV KCSLEESEKQ VLKQGSFQRL CLSDVSNSSS TQAIEDISIS FAGSKLYAFT LEELREATNS FSWSNMLGEG GFGPVYKGFV
101: DDKLRSGLKA QTVAVKRLDL DGLQGHREWL AEIIFLGQLR HPHLVKLIGY CYEDEHRLLM YEYMPRGSLE NQLFRRYSAA MPWSTRMKIA LGAAKGLAFL
201: HEADKPVIYR DFKASNILLD SDFTAKLSDF GLAKDGPEGE DTHVTTRIMG TQGYAAPEYI MTGHLTTKSD VYSYGVVLLE LLTGRRVVDK SRSNEGKSLV
301: EWARPLLRDQ KKVYNIIDRR LEGQFPMKGA MKVAMLAFKC LSHHPNARPT MSDVIKVLEP LQDYDDVFIG PFVYVAVSET GDKHKI

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.