CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52268	Soybean	plastid	93.95	95.45
KRH05309	Soybean	plastid	82.37	81.09
KRH15727	Soybean	cytosol, mitochondrion, plastid	81.32	79.43
VIT_04s0008g02070.t01	Wine grape	cytosol	72.89	62.95
AT2G26290.1	Thale cress	mitochondrion	64.47	57.78
Bra034302.1-P	Field mustard	plastid	63.95	57.31
KRH12542	Soybean	cytosol	67.89	56.33
CDY48175	Canola	plastid	28.68	55.9
KRH19325	Soybean	nucleus	66.32	55.88
Solyc08g061250.2.1	Tomato	cytosol	63.95	55.61
KRH37497	Soybean	plastid	67.63	55.51
PGSC0003DMT400033828	Potato	cytosol	63.16	55.43
KRH02603	Soybean	nucleus	66.05	55.04
CDX77041	Canola	endoplasmic reticulum, plasma membrane	33.68	53.78
KRH06195	Soybean	plastid	62.89	52.99
KRH39720	Soybean	plastid	58.95	52.96
KRH59124	Soybean	cytosol, mitochondrion	52.11	51.83
KRH60107	Soybean	cytosol	51.58	51.72
KRH41391	Soybean	cytosol	51.32	51.45
KRH43007	Soybean	cytosol	51.58	51.44
KRH47613	Soybean	plastid	62.37	51.19
KRH76414	Soybean	plastid	58.68	50.23
KRH40618	Soybean	cytosol	54.47	47.92
KRH00549	Soybean	cytosol	54.47	46.94
KRH13000	Soybean	cytosol	21.84	46.63
KRH07729	Soybean	cytosol	53.42	46.24
KRG93514	Soybean	cytosol	28.68	44.86
KRG93513	Soybean	plastid	40.53	38.99
KRG93548	Soybean	cytosol	40.0	33.93

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100805771	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:ACUP02002173	EnsemblPlantsGene:GLYMA_04G056900
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	UniProt:K7KIB4	EnsemblPlants:KRH61599	ProteinID:KRH61599	ProteinID:KRH61599.1
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF15	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
UniParc:UPI0002339807	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:4617162..4620248

Molecular Weight (calculated)

42838.0 Da

IEP (calculated)

7.802

GRAVY (calculated)

-0.167

Length

380 amino acids

Sequence
(BLAST)

001: MSSKKITWKS IVLILSCYKT QCHLQDSEKQ VLKQGSFQRL CLSDISIPSS PQAIEDLSIS ISLVGPKLYT FPLDELREAT HNFSWNNFLG EGGFGPVYKG
101: FVDDKLRLGL KAQPVAVKQL DLDGLQGHRE WLAEIIFLGQ LRHPHLVKLI GYCCEDEDRL LVYEYMARGS LENQLHRRYS AALPWSTRMK IALGAARGLA
201: FLHEADKPVI YRDFKTSNIL LDSDYIAKLS DLGLAKDGPE GEDTHVTTTC IMGTRGYAAP EYIMSGHLST KSDVYSYGVV LLELLTGRRV VDMCRPNRER
301: SLVEWARPLL RDQRKLYHII DPRLEGQFPM KGALKVAALT YKCLSHHPNP RPSMSDVVKI LESLQDLDDV IIGPFVYVAG

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.