CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX72718
CDX90305
CDY12116
CDY22394
CDY36901
CDY44976
CDY58069
CDY58070
CDY70805

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61590.1	CDY36901	AT3G48150.1	21798944
AT1G61590.1	CDY44976	AT3G48150.1	21798944
AT1G61590.1	CDY58069	AT3G48150.1	21798944
AT1G61590.1	CDY58070	AT3G48150.1	21798944
AT1G61590.1	CDY70805	AT3G48150.1	21798944
AT1G61590.1	CDX72718	AT4G39050.1	21798944
AT1G61590.1	CDX90305	AT4G39050.1	21798944
AT1G61590.1	CDY12116	AT4G39050.1	21798944
AT1G61590.1	CDY22394	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038591.1-P	Field mustard	plastid	99.29	99.29
CDY47586	Canola	plastid	94.58	96.16
CDY65105	Canola	cytosol	12.5	94.64
CDY65103	Canola	plastid	35.14	93.71
AT1G61590.1	Thale cress	plastid	92.22	92.22
CDY65104	Canola	cytosol	36.79	91.76
CDY03843	Canola	plastid	66.27	91.23
CDY52677	Canola	cytosol	15.33	89.04
CDY52676	Canola	cytosol, nucleus, plastid	34.2	84.8
VIT_02s0087g00270.t01	Wine grape	plastid	70.99	70.99
Solyc08g074980.2.1	Tomato	plastid	68.87	69.19
PGSC0003DMT400040626	Potato	plastid	68.4	68.88
GSMUA_Achr2P17920_001	Banana	cytosol	58.96	65.44
CDY56059	Canola	cytosol	22.17	63.95
HORVU6Hr1G032540.8	Barley	mitochondrion, plastid	58.25	57.44
KRH07729	Soybean	cytosol	59.2	57.18
Os03t0364400-01	Rice	plasma membrane	59.2	56.15
Zm00001d029258_P001	Maize	mitochondrion, plastid	57.08	56.02
Zm00001d047437_P001	Maize	plastid	57.78	55.68
OQU92552	Sorghum	plastid	57.08	55.38
TraesCS4D01G166800.1	Wheat	cytosol	58.25	55.26
TraesCS4B01G162700.1	Wheat	cytosol	57.31	54.36
CDY68189	Canola	cytosol	48.11	53.83
TraesCS6D01G027700.1	Wheat	cytosol	54.25	53.24
TraesCS6B01G033300.1	Wheat	cytosol	54.25	53.12
TraesCS6A01G024300.1	Wheat	cytosol	54.01	52.89
CDY72324	Canola	cytosol, plasma membrane	38.68	51.41
CDX83496	Canola	cytosol, plastid	48.58	50.49
CDX74646	Canola	endoplasmic reticulum, plasma membrane	52.59	49.56
CDY33401	Canola	cytosol	53.3	49.45
CDY65349	Canola	cytosol	53.3	49.45
CDX68261	Canola	mitochondrion, plastid	44.58	47.73
CDX68181	Canola	cytosol	44.34	47.59
CDY65019	Canola	mitochondrion, plastid	44.1	47.22
CDX85839	Canola	cytosol	43.87	47.09
CDY20721	Canola	cytosol	44.81	45.78
CDY41811	Canola	cytosol	44.58	45.54
CDX77041	Canola	endoplasmic reticulum, plasma membrane	25.24	44.96
CDY47750	Canola	cytosol	44.34	44.76
CDY32778	Canola	cytosol	44.34	44.66
CDY48175	Canola	plastid	20.28	44.1
CDY49088	Canola	cytosol	37.03	43.98
CDY68998	Canola	cytosol	23.35	42.31
CDX86877	Canola	plastid	43.4	42.3
CDY66556	Canola	plastid	43.87	42.27
CDY49854	Canola	nucleus	42.22	42.22
CDY41127	Canola	cytosol	44.1	42.02
CDX94273	Canola	cytosol	44.1	42.02
CDX96417	Canola	plastid	44.58	41.91
CDX72925	Canola	plastid	44.58	41.72
CDX82145	Canola	plastid	37.74	40.61
CDY39319	Canola	cytosol, plastid	36.56	37.26
CDY20019	Canola	cytosol	16.75	33.65
CDY50604	Canola	cytosol	18.87	32.52

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078GNW1	UniProt:A0A078GNW1	EnsemblPlants:CDY26353
ProteinID:CDY26353	ProteinID:CDY26353.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00035102001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF495	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDB38B	SEG:seg	:	:

Description

BnaA03g60290DBnaA03g60290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNW1]

Coordinates

chrLK032188:-:507865..510110

Molecular Weight (calculated)

47107.6 Da

IEP (calculated)

9.589

GRAVY (calculated)

-0.325

Length

424 amino acids

Sequence
(BLAST)

001: MRDSSTTTST KSSPLWKPFA SNCCSVDDQT VLGNLSRCRP SKSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAEAL GADLVDFRMC ELKMITQCFF
101: RNYLLGEGGF GKVYKGYIDE NLRQSLKAQP VAVKLLDIEG LQGHREWLSE VILLGQLKHP NLVKLIGYCC EEEERVLIYE FMSRGSLENH LFKRISISLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL ATMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW AKPYLTSSRR LRCVMDQRLA GQYSVKAAKD TALLALQCVS PNPKDRPKMP VVVEVLESLM HHKDMAISSG HWSPSPSSQG
401: GKVSQKVRGD NGNSRKSAPG SLRS

Best Arabidopsis Sequence Match ( AT1G61590.1 )
(BLAST)

001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS

Arabidopsis Description

PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.