Factsheet for VIT_02s0087g00270.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_03s0038g00350.t01
VIT_07s0031g02330.t01
VIT_07s0130g00490.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61590.1	VIT_07s0031g02330.t01	AT3G48150.1	21798944
AT1G61590.1	VIT_07s0130g00490.t01	AT3G48150.1	21798944
AT1G61590.1	VIT_03s0038g00350.t01	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65104	Canola	cytosol	31.6	78.82
PGSC0003DMT400040626	Potato	plastid	77.83	78.38
Solyc08g074980.2.1	Tomato	plastid	77.83	78.2
CDY52677	Canola	cytosol	13.21	76.71
GSMUA_Achr2P17920_001	Banana	cytosol	65.09	72.25
AT1G61590.1	Thale cress	plastid	72.17	72.17
Bra031421.1-P	Field mustard	plastid	70.75	71.77
CDY47586	Canola	plastid	70.52	71.7
Bra038591.1-P	Field mustard	plastid	71.46	71.46
CDY26353	Canola	plastid	70.99	70.99
CDY03843	Canola	plastid	51.18	70.45
CDY65103	Canola	plastid	25.0	66.67
CDY52676	Canola	cytosol, nucleus, plastid	25.47	63.16
HORVU6Hr1G032540.8	Barley	mitochondrion, plastid	63.44	62.56
KRH07729	Soybean	cytosol	63.21	61.05
OQU92552	Sorghum	plastid	62.03	60.18
TraesCS4D01G166800.1	Wheat	cytosol	63.21	59.96
Zm00001d029258_P001	Maize	mitochondrion, plastid	61.08	59.95
Os03t0364400-01	Rice	plasma membrane	62.74	59.51
Zm00001d047437_P001	Maize	plastid	61.56	59.32
TraesCS4B01G162700.1	Wheat	cytosol	62.5	59.28
TraesCS6B01G033300.1	Wheat	cytosol	59.43	58.2
TraesCS6D01G027700.1	Wheat	cytosol	59.2	58.1
TraesCS6A01G024300.1	Wheat	cytosol	58.73	57.51
VIT_11s0016g01060.t01	Wine grape	mitochondrion, plastid	57.78	55.43
VIT_06s0004g00220.t01	Wine grape	mitochondrion, plastid	47.88	53.42
VIT_17s0000g05890.t01	Wine grape	cytosol	37.26	51.8
VIT_08s0056g00150.t01	Wine grape	cytosol	52.59	51.62
VIT_04s0008g02070.t01	Wine grape	cytosol	52.12	50.23
VIT_09s0002g01110.t01	Wine grape	mitochondrion	51.89	50.0
VIT_11s0065g00470.t01	Wine grape	cytosol	48.35	44.96
VIT_01s0026g01870.t01	Wine grape	cytosol	39.15	42.67
CDY65105	Canola	cytosol	4.95	37.5
VIT_11s0016g01010.t01	Wine grape	cytosol	12.03	30.36

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100252865	wikigene:100252865	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:AM426975
ProteinID:CAN69043	ProteinID:CAN69043.1	ProteinID:CBI29228	ProteinID:CBI29228.3	UniProt:D7TFF5	EMBL:FN595769
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100252865	wikigene:LOC100252865
PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF495
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE3332
ArrayExpress:VIT_02s0087g00270	EnsemblPlantsGene:VIT_02s0087g00270	EnsemblPlants:VIT_02s0087g00270.t01	RefSeq:XP_002265959	RefSeq:XP_002265959.2	SEG:seg

Description

No Description!

Coordinates

chr2:+:17515272..17517964

Molecular Weight (calculated)

47264.7 Da

IEP (calculated)

9.930

GRAVY (calculated)

-0.407

Length

424 amino acids

Sequence
(BLAST)

001: MKESKPWRPF TANCCSAEDH TVLGNFSRCR PSRSEFSKNI APLPSFRRLS FSDLSRSSST RVNEDLAQSF GPELHDFQLS ELRAITQNFS SNFFLGEGGF
101: GTVHKGYIDE NLRQGLKAQA VAVKLLDIEG LQGHREWLAE VIFLGQLRHP NLVKLIGYCC EDDERLLVYE FMPRGSLENH LFKRLSVSLP WGTRLKIAVG
201: AAKGLAFLHG AEQPVIYRDF KTSNVLLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTF GYAAPEYVST GHLTTKSDVY SFGVVLLEML TGRRSMDKSR
301: PKNEQNLVDW TKPYLTSSRR LRYIMDPRLA GQYSVKGAKE IALLALQCIS SNPKDRPRMP GVVETLEGLQ HLRDMAVTCG QWPATPKSTR NGAAVKGRRE
401: NNRVGTQCKS TPIAPKPEKL SKGT

Best Arabidopsis Sequence Match ( AT1G61590.1 )
(BLAST)

001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS

Arabidopsis Description

PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.