Factsheet for VIT_01s0026g01870.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g05890.t01	Wine grape	cytosol	32.9	41.97
VIT_06s0004g00220.t01	Wine grape	mitochondrion, plastid	38.82	39.74
VIT_02s0087g00270.t01	Wine grape	plastid	42.67	39.15
VIT_11s0016g01060.t01	Wine grape	mitochondrion, plastid	40.87	35.97
VIT_04s0008g02070.t01	Wine grape	cytosol	40.62	35.91
VIT_08s0056g00150.t01	Wine grape	cytosol	39.85	35.88
VIT_11s0065g00470.t01	Wine grape	cytosol	40.36	34.43
VIT_09s0002g01110.t01	Wine grape	mitochondrion	38.56	34.09
VIT_11s0016g01010.t01	Wine grape	cytosol	7.71	17.86

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100241319	wikigene:100241319	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CCB56574
ProteinID:CCB56574.1	UniProt:F6HPE6	EMBL:FN596002	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100241319	wikigene:LOC100241319	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF99	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001982AF3	ArrayExpress:VIT_01s0026g01870
EnsemblPlantsGene:VIT_01s0026g01870	EnsemblPlants:VIT_01s0026g01870.t01	unigene:Vvi.18455	RefSeq:XP_002271583	RefSeq:XP_002271583.1	:

Description

No Description!

Coordinates

chr1:+:11232314..11234303

Molecular Weight (calculated)

43825.5 Da

IEP (calculated)

9.883

GRAVY (calculated)

-0.623

Length

389 amino acids

Sequence
(BLAST)

001: MGNCLKKKKL EDPNRDDARP PTERRPRGKK HGPNTQRDRS LARAIKKEEV LHAYRPTQFS YNVLHAATNK FSNKNLIGRG GFGDVFKGWI HSCAKTPAKP
101: NDGQAIAVKR LRNKQPQGHE AWQNELNFLT KISHQNLVKL IGYCCECEHK ILVYEYMPKG SLDAHLSKER DTELTWGRRI KIAVGVARGL DHLHTVPRPI
201: IHRDLKTSNV LLDADFNPKL SDFGLAKYGP HDHETHVSTR VLGTKGYVAP EYIGTGHLTL KSDVYSFGVV LLEILSGSSA VDRFSNGMLE NLADHAKPYL
301: SNKLRLPHVI DKRLGSNFSM EEAQELAEII LQCLNSDANS RPTMTEVLSS LEQLEQHRDS SKHNLRGLAA PQKVLPLNFH RDIKENPVS

Best Arabidopsis Sequence Match ( AT1G14370.1 )
(BLAST)

001: MGNCLDSSAK VDNSNHSPHA NSASSGSKVS SKTSRSTGPS GLSTTSYSTD SSFGPLPTLR TEGEILSSPN LKAFTFNELK NATKNFRQDN LLGEGGFGCV
101: FKGWIDQTSL TASRPGSGIV VAVKQLKPEG FQGHKEWLTE VNYLGQLSHP NLVLLVGYCA EGENRLLVYE FMPKGSLENH LFRRGAQPLT WAIRMKVAVG
201: AAKGLTFLHE AKSQVIYRDF KAANILLDAD FNAKLSDFGL AKAGPTGDNT HVSTKVIGTH GYAAPEYVAT GRLTAKSDVY SFGVVLLELI SGRRAMDNSN
301: GGNEYSLVDW ATPYLGDKRK LFRIMDTKLG GQYPQKGAFT AANLALQCLN PDAKLRPKMS EVLVTLEQLE SVAKPGTKHT QMESPRFHHS SVMQKSPVRY
401: SHDRPLLHMT PGASPLPSYT QSPRVR

Arabidopsis Description

PBL2PBL2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI52]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.