Factsheet for VIT_08s0056g00150.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68189	Canola	cytosol	76.16	86.81
KRH40618	Soybean	cytosol	85.42	85.42
AT5G01020.1	Thale cress	plastid	80.79	85.12
Bra000295.1-P	Field mustard	cytosol	77.55	85.03
Solyc10g074710.1.1	Tomato	plastid	83.56	84.74
PGSC0003DMT400071214	Potato	cytosol	83.56	84.74
CDX83496	Canola	cytosol, plastid	78.7	83.33
KRH00549	Soybean	cytosol	84.95	83.22
GSMUA_Achr10P...	Banana	cytosol	74.07	81.84
Os12t0121100-01	Rice	cytosol	70.37	81.07
GSMUA_Achr7P21830_001	Banana	cytosol	77.55	80.92
EES15612	Sorghum	cytosol	76.39	80.49
EES09159	Sorghum	cytosol	76.39	80.49
TraesCS4D01G121800.3	Wheat	cytosol	75.69	79.76
TraesCS4A01G191500.1	Wheat	cytosol	75.46	79.51
HORVU5Hr1G046020.3	Barley	cytosol	75.23	79.08
TraesCS4B01G123800.2	Wheat	cytosol	75.0	79.02
Os11t0121400-01	Rice	cytosol, plasma membrane	75.46	78.93
TraesCS5B01G143500.1	Wheat	cytosol	75.0	75.52
Os11t0122150-00	Rice	cytosol	17.36	74.26
HORVU4Hr1G023850.2	Barley	plastid	72.45	72.79
TraesCS5D01G147600.2	Wheat	plastid	72.45	71.79
TraesCS5A01G144600.1	Wheat	mitochondrion, plastid	72.45	71.79
Zm00001d052376_P006	Maize	cytosol	68.29	65.85
Os11t0121500-01	Rice	cytosol	21.99	65.52
GSMUA_Achr11P...	Banana	cytosol	79.17	63.22
Zm00001d005036_P003	Maize	cytosol	69.68	61.3
VIT_06s0004g00220.t01	Wine grape	mitochondrion, plastid	52.31	59.47
VIT_11s0016g01060.t01	Wine grape	mitochondrion, plastid	55.32	54.07
VIT_17s0000g05890.t01	Wine grape	cytosol	37.73	53.44
VIT_02s0087g00270.t01	Wine grape	plastid	51.62	52.59
VIT_04s0008g02070.t01	Wine grape	cytosol	51.39	50.45
VIT_11s0065g00470.t01	Wine grape	cytosol	52.78	50.0
VIT_09s0002g01110.t01	Wine grape	mitochondrion	48.61	47.73
VIT_01s0026g01870.t01	Wine grape	cytosol	35.88	39.85
VIT_11s0016g01010.t01	Wine grape	cytosol	14.35	36.9

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100260389	wikigene:100260389	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:CAQ58609
ProteinID:CAQ58609.1	ProteinID:CAQ58633	ProteinID:CAQ58633.1	ProteinID:CCB55934	ProteinID:CCB55934.1	EMBL:CU914150
EMBL:CU914151	UniProt:F6HMQ9	EMBL:FN595995	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004713	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018108
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100260389	wikigene:LOC100260389
PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF136	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC56231
UniParc:UPI00019839FB	ArrayExpress:VIT_08s0056g00150	EnsemblPlantsGene:VIT_08s0056g00150	EnsemblPlants:VIT_08s0056g00150.t01	unigene:Vvi.15081	RefSeq:XP_002265437
RefSeq:XP_002265437.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:-:294822..299147

Molecular Weight (calculated)

47541.7 Da

IEP (calculated)

8.987

GRAVY (calculated)

-0.331

Length

432 amino acids

Sequence
(BLAST)

001: MGNCGSTEDN PVVSHAQVQQ LHILSSLSVK DAAPNCGKKH SRSVSDLSDH HSTPRNLDDS GKNSLLYTHV IAFTLFELET ITKSFRSDYI LGEGGFGTVY
101: KGYIDENVRV GLKSLPVAVK VLNKEGFQGH REWLTEVNFL GQLRHPNLVK LIGYCCEDDH RLLVYEFMFR GSLENHLFRK ATVPLSWATR MMIALGAAKG
201: LAFLHNAERP VIYRDFKTSN ILLDSDYTAK LSDFGLAKAG PQGDETHVST RVMGTYGYAA PEYVMTGHLT ARSDVYSFGV VLLELLTGRK SVDKTRPSKE
301: QSLVDWARPK LNDKRKLLQI IDPRLENQYS VRAAQKACSL AYYCLSQNPK ARPLMSDVVE TLEPLQDSSG GTSEVSSSTK NLSVGSGGPF AKAGMSDYRM
401: QHRFANKVGA GAVCRSPNPN CSPGGPAACR VR

Best Arabidopsis Sequence Match ( AT5G01020.1 )
(BLAST)

001: MGNCGTRDEA AVFTPQAQAQ QLQKKHSRSV SDLSDPSTPR FRDDSRTPIS YAQVIPFTLF ELETITKSFR PDYILGEGGF GTVYKGYIDD NLRVGLKSLP
101: VAVKVLNKEG LQGHREWLTE VNFLGQLRHP NLVKLIGYCC EDDHRLLVYE FMLRGSLENH LFRKTTAPLS WSRRMMIALG AAKGLAFLHN AERPVIYRDF
201: KTSNILLDSD YTAKLSDFGL AKAGPQGDET HVSTRVMGTY GYAAPEYVMT GHLTARSDVY SFGVVLLEML TGRKSVDKTR PSKEQNLVDW ARPKLNDKRK
301: LLQIIDPRLE NQYSVRAAQK ACSLAYYCLS QNPKARPLMS DVVETLEPLQ CTGDALIPCA TTTAGAAFAM GGVPDYRMHR RFAKNVGPGA ICRSPNPNYS
401: PGGPAACRVR

Arabidopsis Description

PBL8Probable serine/threonine-protein kinase PBL8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXZ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.