Factsheet for Solyc10g074710.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071214	Potato	cytosol	99.06	99.06
CDY68189	Canola	cytosol	75.82	85.22
AT5G01020.1	Thale cress	plastid	80.75	83.9
VIT_08s0056g00150.t01	Wine grape	cytosol	84.74	83.56
Bra000295.1-P	Field mustard	cytosol	76.53	82.74
CDX83496	Canola	cytosol, plastid	78.17	81.62
Os12t0121100-01	Rice	cytosol	70.42	80.0
GSMUA_Achr10P...	Banana	cytosol	73.24	79.8
GSMUA_Achr7P21830_001	Banana	cytosol	77.23	79.47
TraesCS4A01G191500.1	Wheat	cytosol	74.65	77.56
EES15612	Sorghum	cytosol	74.65	77.56
TraesCS4D01G121800.3	Wheat	cytosol	74.41	77.32
EES09159	Sorghum	cytosol	74.41	77.32
TraesCS4B01G123800.2	Wheat	cytosol	74.18	77.07
HORVU5Hr1G046020.3	Barley	cytosol	74.18	76.89
Os11t0121400-01	Rice	cytosol, plasma membrane	74.41	76.76
TraesCS5B01G143500.1	Wheat	cytosol	74.65	74.13
Os11t0122150-00	Rice	cytosol	17.37	73.27
HORVU4Hr1G023850.2	Barley	plastid	72.54	71.86
TraesCS5D01G147600.2	Wheat	plastid	72.54	70.87
TraesCS5A01G144600.1	Wheat	mitochondrion, plastid	72.54	70.87
Zm00001d052376_P006	Maize	cytosol	66.43	63.17
Os11t0121500-01	Rice	cytosol	21.36	62.76
GSMUA_Achr11P...	Banana	cytosol	76.76	60.44
Zm00001d005036_P003	Maize	cytosol	68.08	59.06
Solyc12g009310.1.1	Tomato	cytosol	50.23	57.07
Solyc01g028830.2.1	Tomato	plastid	51.64	56.99
Solyc05g025820.2.1	Tomato	cytosol	54.23	56.62
Solyc07g041940.2.1	Tomato	cytosol, plastid	54.93	53.92
Solyc08g074980.2.1	Tomato	plastid	52.35	52.84
Solyc12g049360.1.1	Tomato	vacuole	50.23	51.07
Solyc07g042590.2.1	Tomato	cytosol	51.41	49.55
Solyc08g061250.2.1	Tomato	cytosol	49.06	47.83
KRH13000	Soybean	cytosol	18.78	44.94
Solyc06g062920.2.1	Tomato	plastid	48.83	44.83

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4D1R3	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF136	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc10g074710.1	EnsemblPlants:Solyc10g074710.1.1	UniParc:UPI0002769A53	SEG:seg

Description

No Description!

Coordinates

chr10:+:58327353..58330366

Molecular Weight (calculated)

47160.2 Da

IEP (calculated)

9.330

GRAVY (calculated)

-0.381

Length

426 amino acids

Sequence
(BLAST)

001: MGNCGTREES AVVSNAHHQV QQQQGLSLGS RIGIDSKKHS HSRSTSDLSD PSTPRNLEDF RKNAVLYTHI IAFTLFELET ITKSFRSDYI LGEGGFGTVY
101: KGYIDENVRV GLKSLPVAVK VLNKEGLQGH REWLTEVNFL GQLRHSNLVK LIGYCCEDDH RLLVYEFMFR GSLENHLFRR ATVSLSWATR MMIALGAAKG
201: LAFLHNAERP VIYRDFKTSN ILLDSDYTAK LSDFGLAKAG PQGDETHVST RVMGTYGYAA PEYVMTGHLT ARSDVYSFGV VLLELLTGRK SVDKTRPSKE
301: QNLVDWARPK LNDKRKMLQI IDPRLDNQYS VRAAQKACSL AYYCLSQNPK ARPLMSDVVE TLEPLQSSGG STNEASSTGT AVRFAIGKVP DYRTHHRYGS
401: SLGTAAGCRS PNPNCSPGGP AACRVR

Best Arabidopsis Sequence Match ( AT5G01020.1 )
(BLAST)

001: MGNCGTRDEA AVFTPQAQAQ QLQKKHSRSV SDLSDPSTPR FRDDSRTPIS YAQVIPFTLF ELETITKSFR PDYILGEGGF GTVYKGYIDD NLRVGLKSLP
101: VAVKVLNKEG LQGHREWLTE VNFLGQLRHP NLVKLIGYCC EDDHRLLVYE FMLRGSLENH LFRKTTAPLS WSRRMMIALG AAKGLAFLHN AERPVIYRDF
201: KTSNILLDSD YTAKLSDFGL AKAGPQGDET HVSTRVMGTY GYAAPEYVMT GHLTARSDVY SFGVVLLEML TGRKSVDKTR PSKEQNLVDW ARPKLNDKRK
301: LLQIIDPRLE NQYSVRAAQK ACSLAYYCLS QNPKARPLMS DVVETLEPLQ CTGDALIPCA TTTAGAAFAM GGVPDYRMHR RFAKNVGPGA ICRSPNPNYS
401: PGGPAACRVR

Arabidopsis Description

PBL8Probable serine/threonine-protein kinase PBL8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXZ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.