Factsheet for Solyc12g049360.1.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
cytosol 1
vacuole 4
nucleus 1
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	96.42	95.28
Solyc06g062920.2.1	Tomato	plastid	69.69	62.93
Solyc05g025820.2.1	Tomato	cytosol	58.47	60.05
Solyc07g041940.2.1	Tomato	cytosol, plastid	58.47	56.45
CDX68261	Canola	mitochondrion, plastid	52.74	55.81
CDY65019	Canola	mitochondrion, plastid	52.74	55.81
VIT_09s0002g01110.t01	Wine grape	mitochondrion	58.47	55.68
Bra003875.1-P	Field mustard	mitochondrion, plastid	52.51	55.56
KRH06195	Soybean	plastid	59.19	54.99
KRH47613	Soybean	plastid	59.67	54.0
Solyc12g009310.1.1	Tomato	cytosol	47.73	53.33
Solyc08g061250.2.1	Tomato	cytosol	54.65	52.4
Solyc10g074710.1.1	Tomato	plastid	51.07	50.23
CDX72925	Canola	plastid	54.18	50.11
Solyc08g074980.2.1	Tomato	plastid	50.36	50.0
AT1G72540.1	Thale cress	plastid	53.7	50.0
CDX96417	Canola	plastid	53.7	49.89
CDY49854	Canola	nucleus	50.36	49.76
Bra016050.1-P	Field mustard	plastid	53.22	49.45
Bra008038.1-P	Field mustard	plastid	52.74	49.44
Solyc01g028830.2.1	Tomato	plastid	45.35	49.22
CDX82145	Canola	plastid	44.63	47.46
Solyc07g042590.2.1	Tomato	cytosol	47.97	45.48

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4DFL6	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF123	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc12g049360.1	EnsemblPlants:Solyc12g049360.1.1	UniParc:UPI00027699EE	:	:	:

Description

No Description!

Coordinates

chr12:-:36987083..36989573

Molecular Weight (calculated)

46954.5 Da

IEP (calculated)

8.424

GRAVY (calculated)

-0.347

Length

419 amino acids

Sequence
(BLAST)

001: MAIKILLKSL LPNCFNVKIN DAIIHPHHDK INGNSRLGVG DISDPESPSN CMSEISSNAI IGTNLHVFTY AQLKVITSNF SSHNFLGEGG FGPVFKGFID
101: DKIKYGLDAQ PVAVKLLDLE GDQGHIEWLT EVVLLGQLRH PNLVKLIGYC WEDKQRLLVY EYMARGNLEN QLFRRCSSSL PWLTRMKIAL DAAKGLAFLH
201: GEKKPVIYRD FKASNILLDS DYTAKLSDFG LAKDGPEGSD THVTTRVMGT YGYAAPEYMM TGYLTTRSDV YSYGVVLLEL LTGRQAIDKK RGSREQNLVE
301: WAKPFLRDSH KLERIIDPRL EGEYSTQGAK KVATLAYQCL SHQPKSRPTM SNVVKTLEPI LDLKDIPIGS FVYVVPSFDS KSGLKTKGNE ENKMHIISDK
401: NHDKENAREM NQQKSATNI

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.