Factsheet for Bra003875.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68261	Canola	mitochondrion, plastid	99.24	99.24
CDY65019	Canola	mitochondrion, plastid	96.97	96.97
Bra008038.1-P	Field mustard	plastid	89.14	78.97
Bra016050.1-P	Field mustard	plastid	87.88	77.16
AT1G72540.1	Thale cress	plastid	87.63	77.11
KRH06195	Soybean	plastid	59.85	52.55
Solyc12g049360.1.1	Tomato	vacuole	55.56	52.51
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	55.81	52.12
KRH47613	Soybean	plastid	59.6	50.97
Bra000295.1-P	Field mustard	cytosol	48.48	48.73
Bra015174.1-P	Field mustard	cytosol	56.06	48.58
Bra035394.1-P	Field mustard	endoplasmic reticulum, plasma membrane	55.05	48.44
PGSC0003DMT400012413	Potato	cytosol	56.57	48.28
Solyc06g062920.2.1	Tomato	plastid	56.57	48.28
VIT_09s0002g01110.t01	Wine grape	mitochondrion	53.03	47.73
Bra014742.1-P	Field mustard	cytosol, plastid	41.67	47.14
Bra034302.1-P	Field mustard	plastid	49.75	46.46
Bra002815.1-P	Field mustard	endoplasmic reticulum, plasma membrane	28.03	45.68
Bra031421.1-P	Field mustard	plastid	47.22	44.74
Bra038591.1-P	Field mustard	plastid	47.47	44.34
Bra024805.1-P	Field mustard	plastid	32.83	43.77
Bra035622.1-P	Field mustard	cytosol	42.17	40.93
Bra003798.1-P	Field mustard	cytosol	39.65	39.75
Bra019656.1-P	Field mustard	plastid	37.63	39.52
Bra037903.1-P	Field mustard	plastid	45.2	39.25
Bra033198.1-P	Field mustard	cytosol	43.18	38.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra003875	EnsemblPlants:Bra003875.1	EnsemblPlants:Bra003875.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4CI42
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF227	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00025417AD
SEG:seg	:	:	:	:	:

Description

AT1G72540 (E=3e-192) | protein kinase, putative

Coordinates

chrA07:+:15500111..15501545

Molecular Weight (calculated)

44612.7 Da

IEP (calculated)

8.747

GRAVY (calculated)

-0.283

Length

396 amino acids

Sequence
(BLAST)

001: MKRIRFSWKN ICLPISCINN TNQKTTCTTN PSKERLLLLS KQTSVRSRVY LSDFSNSTIS LNDLSNSYLI DIHIFTFEEL KTITQGFSKY NYLGEGGFGE
101: VYKGFVDNSV KTGLKAQPVA VKALKREGGQ GHREWLAEVV ILGQLKHPNL VNLIGYCCED DHRLLVYEYM ERGNLEDHLF QKYGGALPWL TRVNILLGAA
201: KGLDFLHKEE KPVIYRDFKP SNILLSSDYS SKLSDFGLAT DGSEADDADF TKSVMGTEGY AAPEYISAGH LTTMSDVFSF GVVLLEMLTA RKTVKKYRSQ
301: RERNLVEWAR PMLKDPNKLE QIIDPSLEGR YSLEGIRKAA VLAYQCLSHN AKSRPTMATV VKTLERILDL KDIQNGPFVY IVPVAGANKV HDIKCN

Best Arabidopsis Sequence Match ( AT1G72540.1 )
(BLAST)

001: MRFSWKNICL PISCINNTNQ KKTTTTNPPK EKLLLLSRQT SVPSRVYMSD FSNSTISLND FSNSFFINIH IFTYEELKTI TQGFSKYNFL GEGGFGEVYK
101: GFVDDSLKTG LKDQPVAVKA LKREGGQGHR EWLAEVIILG QLKHPHLVNL VGYCCEDDER LLVYEYMERG NLEDHLFQKY GGALPWLTRV KILLGAAKGL
201: EFLHKQEKPV IYRDFKPSNI LLSSDFSSKL SDFGLATDGS EEEDSNFTKS VMGTEGYAAP EYISAGNLTT MSDVFSFGVV LLEMLTARKA VEKYRAQRGR
301: NLVEWARPML KDPNKLERII DPSLEGKYSV EGIRKAAALA YQCLSHNPKS RPTMTTVVKT LEPILDLKDI QNGPFVYIVP VAGVSEVHEI KCKDDVKVVK
401: EETEKDAKVF PRHRAGRRNR RKHKAMRSRA VYSDTALYKS LGTSLYNPAN

Arabidopsis Description

Putative receptor-like protein kinase At1g72540 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.