Factsheet for Solyc05g025820.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005987	Potato	plastid	93.14	92.23
Solyc07g041940.2.1	Tomato	cytosol, plastid	79.41	74.65
VIT_11s0016g01060.t01	Wine grape	mitochondrion, plastid	75.74	69.91
KRH12542	Soybean	cytosol	72.06	64.19
KRH37497	Soybean	plastid	72.79	64.15
KRH19325	Soybean	nucleus	70.59	63.86
CDY33401	Canola	cytosol	71.08	63.46
CDY65349	Canola	cytosol	70.83	63.24
Bra015174.1-P	Field mustard	cytosol	70.83	63.24
KRH02603	Soybean	nucleus	70.34	62.94
AT2G05940.1	Thale cress	cytosol	70.83	62.55
CDX74646	Canola	endoplasmic reticulum, plasma membrane	68.87	62.44
Bra035394.1-P	Field mustard	endoplasmic reticulum, plasma membrane	68.87	62.44
CDY72324	Canola	cytosol, plasma membrane	48.77	62.38
Solyc12g049360.1.1	Tomato	vacuole	60.05	58.47
Solyc01g028830.2.1	Tomato	plastid	52.94	55.96
Solyc06g062920.2.1	Tomato	plastid	62.5	54.96
Solyc08g061250.2.1	Tomato	cytosol	58.09	54.23
Solyc10g074710.1.1	Tomato	plastid	56.62	54.23
Solyc12g009310.1.1	Tomato	cytosol	49.75	54.13
AT5G35580.2	Thale cress	cytosol	65.93	53.16
Solyc08g074980.2.1	Tomato	plastid	53.68	51.9
Solyc07g042590.2.1	Tomato	cytosol	49.75	45.93

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4BZX0	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF123	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc05g025820.2	EnsemblPlants:Solyc05g025820.2.1	UniParc:UPI0002765CE2	:	:	:

Description

No Description!

Coordinates

chr5:-:36956235..36958165

Molecular Weight (calculated)

46005.2 Da

IEP (calculated)

9.627

GRAVY (calculated)

-0.413

Length

408 amino acids

Sequence
(BLAST)

001: MKITWESLVP RCCISEKPKT SKLVSKQSTF HRISASDFSN STISEDLSIS LAGSNLHVFS VQELKVITQN FSSSNFLGEG GFGPVHKGFI DDKLRPGLKP
101: QPVAVKFLDL DGTQGHREWL TEVIFLGQLR HPHLVKLIGY CCEEEHRLLV YEYMPRGSLE NQLFRRYSVS LPWSTRMKIA LGAAKGLAFL HEAEKPVIYR
201: DFKASNILLD SDYNAKLSDF GLAKDGPQGD DTHVSTRVMG TQGYAAPEYL MTGHLTAASD IYSFGVVLLE LLTGRRSVDK TRPNREQNLA DWARPQLKDA
301: RKLARVIDPR LEGLYSSEGV QKAAYVAYQC LSHRPKARPD MTTVVKTLET LKDYKDISTM TFVYIAPVLD QHKRSPQREL LNKTNTNTKS LHKKLTPNSP
401: LHNDFHRA

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.