Factsheet for PGSC0003DMT400005987

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g025820.2.1	Tomato	cytosol	92.23	93.14
PGSC0003DMT400071701	Potato	cytosol	81.55	76.54
VIT_11s0016g01060.t01	Wine grape	mitochondrion, plastid	75.49	70.36
KRH37497	Soybean	plastid	74.76	66.52
KRH19325	Soybean	nucleus	72.57	66.3
KRH12542	Soybean	cytosol	73.54	66.16
CDY33401	Canola	cytosol	73.06	65.86
CDY65349	Canola	cytosol	72.82	65.65
Bra015174.1-P	Field mustard	cytosol	72.82	65.65
KRH02603	Soybean	nucleus	72.09	65.13
CDX74646	Canola	endoplasmic reticulum, plasma membrane	70.39	64.44
Bra035394.1-P	Field mustard	endoplasmic reticulum, plasma membrane	70.39	64.44
AT2G05940.1	Thale cress	cytosol	72.09	64.29
CDY72324	Canola	cytosol, plasma membrane	49.76	64.26
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	60.68	58.96
PGSC0003DMT400061697	Potato	cytosol, plastid	52.67	56.22
PGSC0003DMT400007503	Potato	cytosol	50.24	55.2
PGSC0003DMT400012413	Potato	cytosol	61.65	54.74
PGSC0003DMT400033828	Potato	cytosol	57.52	54.73
AT5G35580.2	Thale cress	cytosol	66.99	54.55
PGSC0003DMT400071214	Potato	cytosol	56.31	54.46
PGSC0003DMT400040626	Potato	plastid	53.16	52.02
PGSC0003DMT400035255	Potato	cytosol	50.49	47.06

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102599519	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZQN3	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400002327
PGSC:PGSC0003DMG400002327	EnsemblPlants:PGSC0003DMT400005987	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF123	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295208E
RefSeq:XP_006355769.1	:	:	:	:	:

Description

Avr9/Cf-9 induced kinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400002327]

Coordinates

chr5:-:25096812..25099180

Molecular Weight (calculated)

46328.4 Da

IEP (calculated)

9.441

GRAVY (calculated)

-0.474

Length

412 amino acids

Sequence
(BLAST)

001: MKITWESLVP SCCISENPKP KPKQSKLVTK QSSFHRISVS DFSGSEDLSI SLAGSNLHIF SVQELKVITQ NFSSSNFLGE GGFGPVHKGF IDDKLRPGLK
101: AQPVAVKLLD LDGTQGHREW LTEVIFLGQL RHPHLVKLIG YCCEEEHRLL AYEYMPRGSL ENQLFRRYSV SLPWSTRMKI ALGAAKGLAF LHEAEKPVIY
201: RDFKASNILL DSDYNAKLSD FGLAKDGPEG DDTHVSTRVM GTQGYAAPEY LMTGHLTAAS DVYSFGVVLL ELLTGRRSVD KSRPNREQNL ADWARPQLKD
301: ARKLGRIIDP RLEGLYSEEG VQKAALVAYQ CLSHRPKARP DMSTVVKTLE TLKDYKDIST MTFVYIAPVD QHKQSPQKEL VNKRNTNSHH HTKSPHKRLT
401: PNSPLHNDFH RA

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.