Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33401 | Canola | cytosol | 88.53 | 89.5 |
| Bra015174.1-P | Field mustard | cytosol | 88.31 | 89.28 |
| CDY65349 | Canola | cytosol | 87.88 | 88.84 |
| VIT_11s0016g01060.t01 | Wine grape | mitochondrion, plastid | 69.91 | 73.08 |
| PGSC0003DMT400005987 | Potato | plastid | 64.29 | 72.09 |
| Solyc05g025820.2.1 | Tomato | cytosol | 62.55 | 70.83 |
| Solyc07g041940.2.1 | Tomato | cytosol, plastid | 65.37 | 69.59 |
| PGSC0003DMT400071701 | Potato | cytosol | 65.37 | 68.79 |
| KRH19325 | Soybean | nucleus | 66.45 | 68.07 |
| AT5G35580.2 | Thale cress | cytosol | 74.46 | 67.98 |
| KRH12542 | Soybean | cytosol | 66.67 | 67.25 |
| KRH02603 | Soybean | nucleus | 66.02 | 66.89 |
| KRH37497 | Soybean | plastid | 66.67 | 66.52 |
| AT2G26290.1 | Thale cress | mitochondrion | 53.25 | 58.02 |
| AT5G01020.1 | Thale cress | plastid | 51.08 | 57.56 |
| AT1G61590.1 | Thale cress | plastid | 50.65 | 55.19 |
| AT1G72540.1 | Thale cress | plastid | 48.05 | 49.33 |
| AT5G56460.1 | Thale cress | cytosol | 43.07 | 48.77 |
| AT1G74490.1 | Thale cress | cytosol | 41.34 | 47.87 |
| AT2G07180.1 | Thale cress | cytosol | 43.72 | 45.7 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.37.1 | MapMan:26.8.2.2.3 | Gene3D:3.30.200.20 | EntrezGene:815147 | ProteinID:AAC95171.1 |
| ProteinID:AEC05986.1 | ArrayExpress:AT2G05940 | EnsemblPlantsGene:AT2G05940 | RefSeq:AT2G05940 | TAIR:AT2G05940 | RefSeq:AT2G05940-TAIR-G |
| EnsemblPlants:AT2G05940.1 | TAIR:AT2G05940.1 | EMBL:AY056245 | EMBL:AY113963 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004675 | GO:GO:0004871 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007166 |
| GO:GO:0007178 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0038023 |
| GO:GO:0042742 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | RefSeq:NP_178651.1 | PFAM:PF07714 | PIRSF:PIRSF000615 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF123 | InterPro:Prot_kinase_dom | UniProt:Q9ZUF4 |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00000A1620 | SEG:seg |
Description
RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
Coordinates
chr2:-:2287238..2289636
Molecular Weight (calculated)
51703.5 Da
IEP (calculated)
9.936
GRAVY (calculated)
-0.639
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.