CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015174.1-P	Field mustard	cytosol	99.78	99.78
CDY65349	Canola	cytosol	99.34	99.34
AT2G05940.1	Thale cress	cytosol	89.5	88.53
CDY72324	Canola	cytosol, plasma membrane	56.24	80.56
CDX74646	Canola	endoplasmic reticulum, plasma membrane	79.21	80.44
PGSC0003DMT400005987	Potato	plastid	65.86	73.06
VIT_11s0016g01060.t01	Wine grape	mitochondrion, plastid	69.58	71.95
Solyc05g025820.2.1	Tomato	cytosol	63.46	71.08
CDY52677	Canola	cytosol	11.16	69.86
CDY65104	Canola	cytosol	25.82	69.41
CDY56059	Canola	cytosol	22.32	69.39
Solyc07g041940.2.1	Tomato	cytosol, plastid	65.21	68.66
PGSC0003DMT400071701	Potato	cytosol	64.99	67.65
KRH19325	Soybean	nucleus	66.52	67.41
KRH12542	Soybean	cytosol	66.96	66.81
KRH37497	Soybean	plastid	67.61	66.74
KRH02603	Soybean	nucleus	66.3	66.45
CDY68189	Canola	cytosol	50.98	61.48
CDX83496	Canola	cytosol, plastid	51.2	57.35
CDX77041	Canola	endoplasmic reticulum, plasma membrane	29.32	56.3
CDX68261	Canola	mitochondrion, plastid	48.58	56.06
CDY48175	Canola	plastid	23.85	55.9
CDY65019	Canola	mitochondrion, plastid	48.14	55.56
CDY03843	Canola	plastid	36.54	54.22
CDY47586	Canola	plastid	49.45	54.2
CDY26353	Canola	plastid	49.45	53.3
CDX96417	Canola	plastid	50.33	51.0
CDX72925	Canola	plastid	50.55	50.99
CDY49854	Canola	nucleus	46.61	50.24
CDY49088	Canola	cytosol	37.42	47.9
CDX82145	Canola	plastid	41.14	47.72
CDY20721	Canola	cytosol	43.33	47.71
CDX68181	Canola	cytosol	40.92	47.34
CDY41811	Canola	cytosol	42.89	47.23
CDY47750	Canola	cytosol	43.11	46.9
CDY32778	Canola	cytosol	43.11	46.79
CDX85839	Canola	cytosol	40.26	46.58
CDY68998	Canola	cytosol	23.63	46.15
CDX86877	Canola	plastid	43.11	45.29
CDY66556	Canola	plastid	43.33	45.0
CDY41127	Canola	cytosol	43.11	44.27
CDX94273	Canola	cytosol	43.11	44.27
CDY65103	Canola	plastid	15.32	44.03
CDY52676	Canola	cytosol, nucleus, plastid	15.75	42.11
CDY39319	Canola	cytosol, plastid	37.64	41.35
CDY20019	Canola	cytosol	18.16	39.34
CDY50604	Canola	cytosol	17.29	32.11
CDY65105	Canola	cytosol	2.41	19.64

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	GO:A0A078H6A2	UniProt:A0A078H6A2
EnsemblPlants:CDY33401	ProteinID:CDY33401	ProteinID:CDY33401.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00054278001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF123	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDFCC4	SEG:seg	:	:	:

Description

BnaA07g04380DBnaA07g04380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6A2]

Coordinates

chrLK032313:-:245209..246872

Molecular Weight (calculated)

50979.9 Da

IEP (calculated)

9.790

GRAVY (calculated)

-0.578

Length

457 amino acids

Sequence
(BLAST)

001: MAVKKKISWR SLVASCLGDP DIIMAPPQKP KRKDDVIKKQ SSFQRLSVLD LSNPSSNTLS EDLSISLAGS DLHKFTLGEL KVITQCFSST NFLGEGGFGP
101: VHKGFVDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLKDARKLD RIMDPRLEGQ YSETGAKKAA ALAYLCLSHR PKNRPCMSTV VSILNDLKDY NDIPMGTFTY TVPNTPEKSV SDNREDEGRV
401: RESNKARKSH HHRSSPTANS PRTKSPTAKS PGGGNHRTTL RNGLNSPMRN EAGGERY

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.