CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008038.1-P	Field mustard	plastid	93.4	82.33
CDY49854	Canola	nucleus	84.26	78.3
AT1G72540.1	Thale cress	plastid	84.52	74.0
CDX68261	Canola	mitochondrion, plastid	73.6	73.23
CDY65019	Canola	mitochondrion, plastid	73.6	73.23
CDX96417	Canola	plastid	83.5	72.95
CDX72925	Canola	plastid	82.49	71.74
CDY65104	Canola	cytosol	25.89	60.0
CDY52677	Canola	cytosol	10.91	58.9
CDY56059	Canola	cytosol	19.54	52.38
CDY72324	Canola	cytosol, plasma membrane	41.37	51.1
CDX77041	Canola	endoplasmic reticulum, plasma membrane	28.93	47.9
KRH06195	Soybean	plastid	54.31	47.45
KRH47613	Soybean	plastid	54.82	46.65
Solyc12g049360.1.1	Tomato	vacuole	47.46	44.63
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	46.95	43.63
CDY68189	Canola	cytosol	41.88	43.54
VIT_09s0002g01110.t01	Wine grape	mitochondrion	48.48	43.41
PGSC0003DMT400012413	Potato	cytosol	50.0	42.46
Solyc06g062920.2.1	Tomato	plastid	49.49	42.03
CDY33401	Canola	cytosol	47.72	41.14
CDY65349	Canola	cytosol	47.72	41.14
CDX83496	Canola	cytosol, plastid	42.39	40.93
CDX74646	Canola	endoplasmic reticulum, plasma membrane	45.94	40.22
CDY68998	Canola	cytosol	23.35	39.32
CDY47586	Canola	plastid	41.12	38.85
CDY20721	Canola	cytosol	40.1	38.07
CDY26353	Canola	plastid	40.61	37.74
CDY32778	Canola	cytosol	40.1	37.53
CDY47750	Canola	cytosol	39.59	37.14
CDY41811	Canola	cytosol	39.09	37.11
CDY03843	Canola	plastid	28.43	36.36
CDY49088	Canola	cytosol	32.49	35.85
CDX86877	Canola	plastid	38.83	35.17
CDY52676	Canola	cytosol, nucleus, plastid	15.23	35.09
CDX94273	Canola	cytosol	39.59	35.06
CDY41127	Canola	cytosol	39.34	34.83
CDX85839	Canola	cytosol	34.77	34.68
CDX68181	Canola	cytosol	34.77	34.68
CDY66556	Canola	plastid	38.58	34.55
CDY20019	Canola	cytosol	16.75	31.28
CDY39319	Canola	cytosol, plastid	32.23	30.53
CDY48175	Canola	plastid	12.69	25.64
CDY50604	Canola	cytosol	13.2	21.14
CDY65105	Canola	cytosol	2.54	17.86
CDY65103	Canola	plastid	6.85	16.98

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078CZ92	EnsemblPlants:CDX82145	ProteinID:CDX82145
ProteinID:CDX82145.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00137199001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF227
InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE2F7A	SEG:seg	:

Description

BnaC02g21450D

Coordinates

chrLK031827:+:1120360..1122314

Molecular Weight (calculated)

44618.8 Da

IEP (calculated)

9.793

GRAVY (calculated)

-0.524

Length

394 amino acids

Sequence
(BLAST)

001: MRFQWKNICL PISCINNTNQ KTKTTNPSKE KLLLLSRQTS VRSRSSKRSH KASQSITTSA KEDLGKSTKE GGQGHREWLA EVIILGQLKH PHLVNLIGYC
101: CEDDHRLLVY EYMERGNLED HLFQKYGGVL PWLTRVKILI GAAKGLEFLH KEEKPVIYRD FKPSNILLSA DYSSKLSDFG LATDGSEVED SNFTKTVMGT
201: EGYAAPEYIS AGHLTTMSDV FSFGVVLLEM LTARKAVEKY RSQRGRRLVE WARPMLKDTN KLEQIIDPSL EGRYSFEGIR KAAELAYQCL SHNPKSRPTM
301: TTVVKTLEPI LDLKDIQNGP FVYIVQVVGS NEVHDVKCKD DVKVVKEEAK VCPKHQGGRK KRRKHKAMRS RTVYSDTTLY KSLGTSLYTQ GGVE

Best Arabidopsis Sequence Match ( AT1G72540.1 )
(BLAST)

001: MRFSWKNICL PISCINNTNQ KKTTTTNPPK EKLLLLSRQT SVPSRVYMSD FSNSTISLND FSNSFFINIH IFTYEELKTI TQGFSKYNFL GEGGFGEVYK
101: GFVDDSLKTG LKDQPVAVKA LKREGGQGHR EWLAEVIILG QLKHPHLVNL VGYCCEDDER LLVYEYMERG NLEDHLFQKY GGALPWLTRV KILLGAAKGL
201: EFLHKQEKPV IYRDFKPSNI LLSSDFSSKL SDFGLATDGS EEEDSNFTKS VMGTEGYAAP EYISAGNLTT MSDVFSFGVV LLEMLTARKA VEKYRAQRGR
301: NLVEWARPML KDPNKLERII DPSLEGKYSV EGIRKAAALA YQCLSHNPKS RPTMTTVVKT LEPILDLKDI QNGPFVYIVP VAGVSEVHEI KCKDDVKVVK
401: EETEKDAKVF PRHRAGRRNR RKHKAMRSRA VYSDTALYKS LGTSLYNPAN

Arabidopsis Description

Putative receptor-like protein kinase At1g72540 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.