Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52677 | Canola | cytosol | 13.01 | 43.84 |
| CDX68181 | Canola | cytosol | 67.89 | 42.28 |
| CDX85839 | Canola | cytosol | 67.89 | 42.28 |
| AT1G74490.1 | Thale cress | cytosol | 60.16 | 37.09 |
| CDY56059 | Canola | cytosol | 20.73 | 34.69 |
| CDY48175 | Canola | plastid | 26.42 | 33.33 |
| CDY65103 | Canola | plastid | 16.26 | 25.16 |
| CDY03843 | Canola | plastid | 30.49 | 24.35 |
| CDY65104 | Canola | cytosol | 16.67 | 24.12 |
| CDY49088 | Canola | cytosol | 31.3 | 21.57 |
| CDY68189 | Canola | cytosol | 30.49 | 19.79 |
| CDY47586 | Canola | plastid | 32.52 | 19.18 |
| CDY39319 | Canola | cytosol, plastid | 32.11 | 18.99 |
| CDX83496 | Canola | cytosol, plastid | 31.3 | 18.87 |
| CDY26353 | Canola | plastid | 32.52 | 18.87 |
| CDX68261 | Canola | mitochondrion, plastid | 30.08 | 18.69 |
| VIT_17s0000g05890.t01 | Wine grape | cytosol | 22.76 | 18.36 |
| CDY65019 | Canola | mitochondrion, plastid | 29.27 | 18.18 |
| CDY20721 | Canola | cytosol | 30.49 | 18.07 |
| CDY32778 | Canola | cytosol | 30.89 | 18.05 |
| CDY47750 | Canola | cytosol | 30.49 | 17.86 |
| CDY41811 | Canola | cytosol | 30.08 | 17.83 |
| CDY65349 | Canola | cytosol | 32.11 | 17.29 |
| CDY33401 | Canola | cytosol | 32.11 | 17.29 |
| CDX74646 | Canola | endoplasmic reticulum, plasma membrane | 31.3 | 17.11 |
| CDX94273 | Canola | cytosol | 30.08 | 16.63 |
| CDY41127 | Canola | cytosol | 30.08 | 16.63 |
| CDX86877 | Canola | plastid | 29.27 | 16.55 |
| HORVU7Hr1G088710.2 | Barley | cytosol | 17.07 | 16.41 |
| CDY66556 | Canola | plastid | 29.27 | 16.36 |
| CDX72925 | Canola | plastid | 30.08 | 16.34 |
| CDX96417 | Canola | plastid | 29.67 | 16.19 |
| CDY49854 | Canola | nucleus | 26.02 | 15.09 |
| CDX82145 | Canola | plastid | 21.14 | 13.2 |
| CDY72324 | Canola | cytosol, plasma membrane | 17.07 | 13.17 |
| HORVU2Hr1G095950.2 | Barley | cytosol | 5.69 | 10.14 |
| TraesCS4B01G325400.1 | Wheat | mitochondrion, plastid | 8.54 | 9.05 |
| TraesCS5A01G497700.1 | Wheat | mitochondrion, plastid | 8.54 | 9.05 |
| CDX77041 | Canola | endoplasmic reticulum, plasma membrane | 6.91 | 7.14 |
| CDY20019 | Canola | cytosol | 5.28 | 6.16 |
| CDY52676 | Canola | cytosol, nucleus, plastid | 2.85 | 4.09 |
| CDY68998 | Canola | cytosol | 3.25 | 3.42 |
| CDY65105 | Canola | cytosol | 0.41 | 1.79 |
Protein Annotations
| Gene3D:3.30.200.20 | MapMan:50.2.7 | GO:A0A078IMI9 | UniProt:A0A078IMI9 | EnsemblPlants:CDY50604 | ProteinID:CDY50604 |
| ProteinID:CDY50604.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00097128001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF07714 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF160 | InterPro:Prot_kinase_dom | SUPFAM:SSF56112 |
| InterPro:Ser-Thr/Tyr_kinase_cat_dom | UniParc:UPI0004EE8D42 | : | : | : | : |
Description
BnaC02g17010DBnaC02g17010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMI9]
Coordinates
chrLK032925:+:61248..62965
Molecular Weight (calculated)
27937.1 Da
IEP (calculated)
6.583
GRAVY (calculated)
-0.437
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKATISADR LPRFQERLTA GAIYSISDFD VARLLSELQT LFTMWHCHGS EGDSDTERIS NLSYPWSLKP LITRKSEASS ALHAPSKEGD VMHSQHLKSF
101: TLDELENATG NFCPESLIGG GFGFVYKGCI NGGPRIDLAV DVKKLKTEGF QGHKEWQREV YYLGRLHHPN LVKFIGYSLE DENSLLIYEY MPNGSLENHL
201: FERGSNVFSW SLPPEYISTQ LKHLITCSES NRPPYRFTKT QEVVSH
101: TLDELENATG NFCPESLIGG GFGFVYKGCI NGGPRIDLAV DVKKLKTEGF QGHKEWQREV YYLGRLHHPN LVKFIGYSLE DENSLLIYEY MPNGSLENHL
201: FERGSNVFSW SLPPEYISTQ LKHLITCSES NRPPYRFTKT QEVVSH
001: MGNCFESCSK RNDNEDDNLD SSVNSKPFSR ANSDTGRSSN LSYPWSLKPL ITRKCEAISA LPPPHKEGDI MHSQYLKSFT LDELKNATGN FCPESLIGEG
101: GFGFVHKGCI NGGPGIELAV AVKKLKTEGL QGHKEWLREV NYLGRLHHPN LVKLIGYSLE NEHRLLVYEH LPNGSLENHL FERSSSVLSW SLRMKVAIGA
201: ARGLCFLHEA NDQVIYRDFK AANILLDSGF NAKLSDFGLA KEGPKDNRSH VTTEVMGTEG YAAPEYLATG HLTTKCDVYS FGVVLLEILS GRRVIDKSKS
301: REEENLVDWA TPYLRDKRKV FRIMDTKLVG QYPQKAAFMM SFLALQCIGD VKVRPSMLEV VSLLEKVPIP RHRKSRSKGF ACTNSASMPS KRFLRHPKD
101: GFGFVHKGCI NGGPGIELAV AVKKLKTEGL QGHKEWLREV NYLGRLHHPN LVKLIGYSLE NEHRLLVYEH LPNGSLENHL FERSSSVLSW SLRMKVAIGA
201: ARGLCFLHEA NDQVIYRDFK AANILLDSGF NAKLSDFGLA KEGPKDNRSH VTTEVMGTEG YAAPEYLATG HLTTKCDVYS FGVVLLEILS GRRVIDKSKS
301: REEENLVDWA TPYLRDKRKV FRIMDTKLVG QYPQKAAFMM SFLALQCIGD VKVRPSMLEV VSLLEKVPIP RHRKSRSKGF ACTNSASMPS KRFLRHPKD
Arabidopsis Description
At1g74490 [Source:UniProtKB/TrEMBL;Acc:Q7Y224]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.