Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G325400.1 | Wheat | mitochondrion, plastid | 61.72 | 68.1 |
| TraesCS5A01G497700.1 | Wheat | mitochondrion, plastid | 61.33 | 67.67 |
| HORVU2Hr1G095950.2 | Barley | cytosol | 33.98 | 63.04 |
| HORVU5Hr1G068890.1 | Barley | cytosol, plasma membrane | 10.16 | 60.47 |
| CDY56059 | Canola | cytosol | 33.2 | 57.82 |
| VIT_17s0000g05890.t01 | Wine grape | cytosol | 50.0 | 41.97 |
| Bra024805.1-P | Field mustard | plastid | 44.53 | 38.38 |
| Bra014742.1-P | Field mustard | cytosol, plastid | 47.27 | 34.57 |
| HORVU7Hr1G096400.1 | Barley | peroxisome, plastid | 46.48 | 32.6 |
| CDX85839 | Canola | cytosol | 48.83 | 31.65 |
| Bra003798.1-P | Field mustard | cytosol | 48.44 | 31.39 |
| CDX68181 | Canola | cytosol | 48.44 | 31.39 |
| HORVU5Hr1G046020.3 | Barley | cytosol | 50.0 | 31.14 |
| AT1G74490.1 | Thale cress | cytosol | 48.44 | 31.08 |
| HORVU2Hr1G031710.1 | Barley | cytosol | 30.08 | 30.92 |
| CDY49088 | Canola | cytosol | 42.58 | 30.53 |
| HORVU4Hr1G064260.3 | Barley | plastid | 46.48 | 30.43 |
| HORVU4Hr1G073020.2 | Barley | plastid | 46.48 | 30.36 |
| HORVU4Hr1G023850.2 | Barley | plastid | 49.61 | 29.53 |
| HORVU6Hr1G032540.8 | Barley | mitochondrion, plastid | 49.22 | 29.3 |
| HORVU0Hr1G012130.1 | Barley | cytosol | 26.56 | 28.81 |
| Bra019656.1-P | Field mustard | plastid | 42.19 | 28.65 |
| HORVU5Hr1G061810.2 | Barley | plastid | 48.05 | 28.41 |
| HORVU3Hr1G051820.4 | Barley | plastid | 48.05 | 28.28 |
| HORVU7Hr1G108150.1 | Barley | mitochondrion, peroxisome | 49.22 | 28.25 |
| HORVU5Hr1G061760.2 | Barley | plastid | 48.83 | 28.09 |
| HORVU5Hr1G061850.11 | Barley | plastid | 49.61 | 27.85 |
| HORVU3Hr1G051830.5 | Barley | plastid | 49.61 | 27.08 |
| CDY39319 | Canola | cytosol, plastid | 43.36 | 26.68 |
| HORVU7Hr1G109590.5 | Barley | plasma membrane | 50.0 | 24.66 |
| HORVU6Hr1G081330.2 | Barley | nucleus, plastid | 48.05 | 24.5 |
| HORVU5Hr1G061820.6 | Barley | plasma membrane | 48.05 | 24.45 |
| HORVU5Hr1G068790.1 | Barley | cytosol | 15.23 | 23.78 |
| HORVU1Hr1G019770.1 | Barley | cytosol | 45.7 | 18.78 |
| CDY50604 | Canola | cytosol | 16.41 | 17.07 |
| HORVU0Hr1G014950.1 | Barley | cytosol | 4.69 | 9.16 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:3.30.200.20 | MapMan:50.2.7 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU7Hr1G088710 | EnsemblPlants:HORVU7Hr1G088710.2 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF182 | InterPro:Prot_kinase_dom | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:538825920..538827130
Molecular Weight (calculated)
24718.8 Da
IEP (calculated)
10.203
GRAVY (calculated)
-0.228
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: NSIKYFKILQ SEVNFLGRLQ HPNLVKLLGY CGEDRDLLLV YEFMPKGSLE NHLFRRGGSL EPLSWATRLK IAAGAARGLA FLHSPGTQII YRDFKASNVL
101: LDHDFAPKLS DFGLAKSGPA AGRSHVTTRV MGSYGYAAPE YVATGHLYVK SDVYGFGVVL LELLTGLRAH DPNRPTHQAN LVEWARPYIC LLYTSPSPRD
201: VLXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXSRRST PEGAAPRSRR GRGPPR
101: LDHDFAPKLS DFGLAKSGPA AGRSHVTTRV MGSYGYAAPE YVATGHLYVK SDVYGFGVVL LELLTGLRAH DPNRPTHQAN LVEWARPYIC LLYTSPSPRD
201: VLXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXSRRST PEGAAPRSRR GRGPPR
001: MILQAEVNYL GQFSHRHLVK LIGYCLEDEH RLLVYEFMPR GSLENHLFRR GLYFQPLSWK LRLKVALGAA KGLAFLHSSE TRVIYRDFKT SNILLDSEYN
101: AKLSDFGLAK DGPIGDKSHV STRVMGTHGY AAPEYLATGH LTTKSDVYSF GVVLLELLSG RRAVDKNRPS GERNLVEWAK PYLVNKRKIF RVIDNRLQDQ
201: YSMEEACKVA TLSLRCLTTE IKLRPNMSEV VSHLEHIQSL NAAIGGNMDK TDRRMRRRSD SVVSKKVNAG FARQTAVGST VVAYPRPSAS PLYV
101: AKLSDFGLAK DGPIGDKSHV STRVMGTHGY AAPEYLATGH LTTKSDVYSF GVVLLELLSG RRAVDKNRPS GERNLVEWAK PYLVNKRKIF RVIDNRLQDQ
201: YSMEEACKVA TLSLRCLTTE IKLRPNMSEV VSHLEHIQSL NAAIGGNMDK TDRRMRRRSD SVVSKKVNAG FARQTAVGST VVAYPRPSAS PLYV
Arabidopsis Description
APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.