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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68181 Canola cytosol 83.71 84.56
CDX85839 Canola cytosol 83.21 84.05
Bra003798.1-P Field mustard cytosol 83.21 84.05
CDY50604 Canola cytosol 37.09 60.16
HORVU2Hr1G095950.2 Barley cytosol 20.55 59.42
VIT_17s0000g05890.t01 Wine grape cytosol 42.61 55.74
TraesCS5A01G497700.1 Wheat mitochondrion, plastid 30.58 52.59
TraesCS4B01G325400.1 Wheat mitochondrion, plastid 30.33 52.16
HORVU7Hr1G088710.2 Barley cytosol 31.08 48.44
AT5G01020.1 Thale cress plastid 46.37 45.12
AT1G61590.1 Thale cress plastid 45.86 43.16
AT2G26290.1 Thale cress mitochondrion 45.36 42.69
AT5G56460.1 Thale cress cytosol 43.36 42.4
AT2G05940.1 Thale cress cytosol 47.87 41.34
AT2G07180.1 Thale cress cytosol 43.61 39.37
AT1G72540.1 Thale cress plastid 39.6 35.11
AT5G35580.2 Thale cress cytosol 44.11 34.78
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20EntrezGene:843790ProteinID:AEE35599.1EMBL:AK227891
ArrayExpress:AT1G74490EnsemblPlantsGene:AT1G74490RefSeq:AT1G74490TAIR:AT1G74490RefSeq:AT1G74490-TAIR-GEnsemblPlants:AT1G74490.1
TAIR:AT1G74490.1Unigene:At.34875EMBL:BT008338GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0038023
InterPro:IPR000719InterPro:Kinase-like_dom_sfRefSeq:NP_177589.2PFAM:PF00069PIRSF:PIRSF000654PO:PO:0000037
PO:PO:0000084PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001185PO:PO:0007611
PO:PO:0007616PO:PO:0009005PO:PO:0009009PO:PO:0009025PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009052PO:PO:0020003PO:PO:0025022PO:PO:0025195PO:PO:0025281
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF160InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSUniProt:Q7Y224SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0000197196:
Description
At1g74490 [Source:UniProtKB/TrEMBL;Acc:Q7Y224]
Coordinates
chr1:-:27994652..27996794
Molecular Weight (calculated)
44648.6 Da
IEP (calculated)
9.027
GRAVY (calculated)
-0.404
Length
399 amino acids
Sequence
(BLAST)
001: MGNCFESCSK RNDNEDDNLD SSVNSKPFSR ANSDTGRSSN LSYPWSLKPL ITRKCEAISA LPPPHKEGDI MHSQYLKSFT LDELKNATGN FCPESLIGEG
101: GFGFVHKGCI NGGPGIELAV AVKKLKTEGL QGHKEWLREV NYLGRLHHPN LVKLIGYSLE NEHRLLVYEH LPNGSLENHL FERSSSVLSW SLRMKVAIGA
201: ARGLCFLHEA NDQVIYRDFK AANILLDSGF NAKLSDFGLA KEGPKDNRSH VTTEVMGTEG YAAPEYLATG HLTTKCDVYS FGVVLLEILS GRRVIDKSKS
301: REEENLVDWA TPYLRDKRKV FRIMDTKLVG QYPQKAAFMM SFLALQCIGD VKVRPSMLEV VSLLEKVPIP RHRKSRSKGF ACTNSASMPS KRFLRHPKD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.